Gene Spea_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2880 
Symbol 
ID5663271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3518976 
End bp3519833 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content45% 
IMG OID641237520 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_001502733 
Protein GI157962699 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.03616e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTAAAAC AACGAATAAT AACAGCAATT TGGTTAATCC CCTTAGTTTT TGGTGCCATC 
TTCGGTCTAC CTACTGAGTA TTTTTCTTGG GCACTATTGG GAGTCTTTTT AATCGCCGCT
AAAGAGTGGG GGCGTATTAT CGATAGTAAC TGTGAAATGA CTCAGTGGAG TTTCACAGTC
ACTATTGGCG TCTTGTTAAC CGCGCTGAAT ATCTTAGTAC CAACCGATGA AATTTGGCTA
CGAGGCATGA TGCACCCGAT ATTCTTAGGG GTCATCCTCA TTGGTGGTTT CTGGTGGTTT
ATCTCCTTTA TCATGGTGTT GTCCTTCCCT AAAAGCGCTC GCTTCTGGGA AAAGAGTCAC
ATGCTTAAAT CGATGTTTGG TCAGTTGACG CTGATCCCAT GCTTCGTGTC ACTTATCTCC
CTTAAGGCTC TTAGTACTCA AGCTTCACCG TATTACGGTG GGATCTTGGT CTTCTTGGTG
ATGTTGGTCG TTTGGGCGAC AGACTCTGGC GCCTATTTTG CGGGGAAAAA GTTTGGTAAG
CGTAAGTTGA TGCCAAATGT GAGTCCAGCG AAAACCATTG AAGGCTTGCT TGGTGGCTTG
TTAACCACAA TGATCGTGGT TGCGGGGGTG ATGTATTTCT CTCCTGAGCA GGAGATAGGT
TTAATTATCG GCGTGACACT CTTTATCGCC TTAGCCTCGG CTGTTGGTGA TTTATCTGAA
AGTATGTTTA AGCGCGTCGC TAAGATTAAA GATTCTGGCA GCATTCTTCC AGGTCATGGT
GGCGTGTTAG ATCGCATCGA TAGCTTAACG GCTGCCCTAC CAGTATTCAC ATTAATCTAT
ATAGCTTTTT GGATGTAA
 
Protein sequence
MLKQRIITAI WLIPLVFGAI FGLPTEYFSW ALLGVFLIAA KEWGRIIDSN CEMTQWSFTV 
TIGVLLTALN ILVPTDEIWL RGMMHPIFLG VILIGGFWWF ISFIMVLSFP KSARFWEKSH
MLKSMFGQLT LIPCFVSLIS LKALSTQASP YYGGILVFLV MLVVWATDSG AYFAGKKFGK
RKLMPNVSPA KTIEGLLGGL LTTMIVVAGV MYFSPEQEIG LIIGVTLFIA LASAVGDLSE
SMFKRVAKIK DSGSILPGHG GVLDRIDSLT AALPVFTLIY IAFWM