Gene Spea_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2871 
SymbolrnhB 
ID5663262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3509209 
End bp3509820 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content46% 
IMG OID641237511 
Productribonuclease HII 
Protein accessionYP_001502724 
Protein GI157962690 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.035191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTGA TTAAAGGTAT TACACCTGAG CAGATAGCTC AAATTTGTGT CGGACAATAT 
GCCGGTGTCG ATGAAGTAGG CCGTGGGCCT TTGATTGGCA ACGTGGTGAC TGCCGCGGTA 
ATTTTAGATC CAAACAATCC TATTGAGGGA TTAAATGATT CTAAGAAGCT ATCAGAGAAA 
AAGCGTGAGT TGCTGTTTGA ACAAATTCAG CAAAAAGCCT TAAGTGTCAG TGTTGGTTCT 
GCCACACCAG CCGAGATTGA TGAGCTTAAT ATTTTGCACG CTACTATGTT AGCGATGCAA 
CGTGCAGTAG CAGGTCTAAA TATTAAGCCA AGTAGCGTGC TAGTTGACGG CAACCGCACA 
CCAGACTTTG GCGTTGAAAG CCATGCTATC ATTAAAGGTG ACGGCCTTAT CGATGCGATT 
AGTGCAGCCT CCATCATAGC TAAGGTTGTC CGTGACCGCG AAATGGATGC CCTTGCTTTG 
CTGTATCCTG AGTATGGCTT TGAAAAGCAT AAGGGATACC CGACCAAAGC TCATTTTGAA 
GCGTTAGCAC AGCACGGCGT ACTACCTGAA CATCGTAAAA GCTTTAGACC CGTACGCGAG 
GCATTGGCTT AA
 
Protein sequence
MAVIKGITPE QIAQICVGQY AGVDEVGRGP LIGNVVTAAV ILDPNNPIEG LNDSKKLSEK 
KRELLFEQIQ QKALSVSVGS ATPAEIDELN ILHATMLAMQ RAVAGLNIKP SSVLVDGNRT 
PDFGVESHAI IKGDGLIDAI SAASIIAKVV RDREMDALAL LYPEYGFEKH KGYPTKAHFE 
ALAQHGVLPE HRKSFRPVRE ALA