Gene Spea_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2792 
Symbol 
ID5663185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3408603 
End bp3409538 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content49% 
IMG OID641237434 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001502647 
Protein GI157962613 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000504065 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTG AGGGACAGGT CGCCATAGTA ACAGGTGCTG CATCGGGCTT GGGAAGAGCC 
TATGCCATAG CCTTAGCTGA GCGAGGAGCA AGAGTGGTTT TGGTGGATAA CGAAACGACT
CAGACAGAGG ATGTTAGCCC AAGCACAACG TTAAACTTAG AACCTAATTC TGGACTAACA
TCTTGTGGTA AGGCGATAAC GGCTCTAGGA GGAGAGTTTA AGTCTTTTGC ATTGGATGTC
ACCAACACTG ATGACATCAA GACTATGATC GATGACGTGG TGCAGTGCTG GGGACGAGTC
GATATCTTAA TCAATAATGC AGGAGTTCAT AACCCTTGTG CATTCGAGCA GATGAGTGCA
TCGAACTGGA AACATCAGCT AGATGTCGAT CTTAATGGCA CCTTCTATAT GACTCAGGCT
GTCTGGCCTC TGATGAAGCG ACAGGGCTAT GGCCGAGTCG TGATGAGCAG TGCCAGTTCC
GTCTATGGTG ACATGTATGA AACCAGTTTT AGCGCTAGCA AGATGGCGGT GATGGGGCTA
GTTAACAGCT TACATCATGA GGGCGTAGAA CACGGTATCA AGGTCAACAG CATCATTCCA
CATGCCGTTA CATCTATGAC TGCATCGCAT TTAGCGTCTA CGGTAAAACC GCTCTTCTCA
AAAACAACCG TTACCGCCAC CATGTTATAC CTTTGTAGCT CCAAAAGCCC TTCAGGGGAG
CATCTCCTCG CCGCGGCTGG TGGAATAAGT CATGCGGCCT TAGTCGAGTT TAGTCCTGGA
CGGTTTAAAG CCGAGGAGTG TACGCCTGAG GTGATCAGCG ATCGTTGGCA TGAGATCTAC
CATGCAAAAC CAGTTACCAT CCATCGAAGC GGTGAGTCAC AGGTACTTGC TTGGGCAAAG
GCGTCGGCAA ATCAGCGTCA CATCAATATA GAGTAA
 
Protein sequence
MRFEGQVAIV TGAASGLGRA YAIALAERGA RVVLVDNETT QTEDVSPSTT LNLEPNSGLT 
SCGKAITALG GEFKSFALDV TNTDDIKTMI DDVVQCWGRV DILINNAGVH NPCAFEQMSA
SNWKHQLDVD LNGTFYMTQA VWPLMKRQGY GRVVMSSASS VYGDMYETSF SASKMAVMGL
VNSLHHEGVE HGIKVNSIIP HAVTSMTASH LASTVKPLFS KTTVTATMLY LCSSKSPSGE
HLLAAAGGIS HAALVEFSPG RFKAEECTPE VISDRWHEIY HAKPVTIHRS GESQVLAWAK
ASANQRHINI E