Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2792 |
Symbol | |
ID | 5663185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3408603 |
End bp | 3409538 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641237434 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001502647 |
Protein GI | 157962613 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000504065 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTTG AGGGACAGGT CGCCATAGTA ACAGGTGCTG CATCGGGCTT GGGAAGAGCC TATGCCATAG CCTTAGCTGA GCGAGGAGCA AGAGTGGTTT TGGTGGATAA CGAAACGACT CAGACAGAGG ATGTTAGCCC AAGCACAACG TTAAACTTAG AACCTAATTC TGGACTAACA TCTTGTGGTA AGGCGATAAC GGCTCTAGGA GGAGAGTTTA AGTCTTTTGC ATTGGATGTC ACCAACACTG ATGACATCAA GACTATGATC GATGACGTGG TGCAGTGCTG GGGACGAGTC GATATCTTAA TCAATAATGC AGGAGTTCAT AACCCTTGTG CATTCGAGCA GATGAGTGCA TCGAACTGGA AACATCAGCT AGATGTCGAT CTTAATGGCA CCTTCTATAT GACTCAGGCT GTCTGGCCTC TGATGAAGCG ACAGGGCTAT GGCCGAGTCG TGATGAGCAG TGCCAGTTCC GTCTATGGTG ACATGTATGA AACCAGTTTT AGCGCTAGCA AGATGGCGGT GATGGGGCTA GTTAACAGCT TACATCATGA GGGCGTAGAA CACGGTATCA AGGTCAACAG CATCATTCCA CATGCCGTTA CATCTATGAC TGCATCGCAT TTAGCGTCTA CGGTAAAACC GCTCTTCTCA AAAACAACCG TTACCGCCAC CATGTTATAC CTTTGTAGCT CCAAAAGCCC TTCAGGGGAG CATCTCCTCG CCGCGGCTGG TGGAATAAGT CATGCGGCCT TAGTCGAGTT TAGTCCTGGA CGGTTTAAAG CCGAGGAGTG TACGCCTGAG GTGATCAGCG ATCGTTGGCA TGAGATCTAC CATGCAAAAC CAGTTACCAT CCATCGAAGC GGTGAGTCAC AGGTACTTGC TTGGGCAAAG GCGTCGGCAA ATCAGCGTCA CATCAATATA GAGTAA
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Protein sequence | MRFEGQVAIV TGAASGLGRA YAIALAERGA RVVLVDNETT QTEDVSPSTT LNLEPNSGLT SCGKAITALG GEFKSFALDV TNTDDIKTMI DDVVQCWGRV DILINNAGVH NPCAFEQMSA SNWKHQLDVD LNGTFYMTQA VWPLMKRQGY GRVVMSSASS VYGDMYETSF SASKMAVMGL VNSLHHEGVE HGIKVNSIIP HAVTSMTASH LASTVKPLFS KTTVTATMLY LCSSKSPSGE HLLAAAGGIS HAALVEFSPG RFKAEECTPE VISDRWHEIY HAKPVTIHRS GESQVLAWAK ASANQRHINI E
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