| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2703 |
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| Symbol | |
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| ID | 5663096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3302028 |
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| End bp | 3303179 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237345 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001502558 |
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| Protein GI | 157962524 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.601624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATTTTC TAGATGGCTC CTTGGCACGA CAAATCGTTA ATCGCACCAT GAAGATTATT
GGTCATAATA TCAATGTGAT GAATAATCAT GGCGTCATTT TAGGCTCGGG AGAGTCTCAC
CGGATCGGCG CCATACACGA AGGTGCACTG CTGGCTATCA GTCAAAAACG CACCGTAGAG
ATTAGCACTC ACAGCACTGG CACACTGCAA GGTGTTAAAC CGGGAATTAA CCTGCCACTA
CATTATAAAG GCAAGGTTAT CGGCGTTATC GGCATCACTG GCGAGCCTGA AAAGCTTCGT
AGTTATGGTG AGCTACTGAA GATGACCGCT GAAATCATCG TTGAGCAGGC TAACACGCTT
GAACAAGCTC AGTGGCAGTA CCGCCAAAAG GAAGAGTTGA TCATCGAGTT AATTAAGTCT
GAGGGCGCTT TTACTTCCCA CCAGCGTAAT TGGGCTTCTC AGCTTAATAT CGATCTCGAT
GCACCGCGCG TTGTGGCTAT AATTCAAGTT CAGGCCGACG AGGAAGAAAC CACGGCTAAC
TCTATGTTGA AGCAGGTTAT GCATCTATTA GAAAATCCAT CGCGGGGCAA CTTAGTCGCC
ATGGCCTCGA TGACGGAGTT AGTTATTTTA AAACCTGCCT TTCTCGATGG AAAGACTTGG
GATCCTAACC TTGAGAGTGA GCGTATCGAT CAACTACTCA TACGGCTTCC CAAAGAACTT
AATAGCCGCT TAAAAATCTC ATTAGGCCAT TTTTTTTCAA ACCCAGAAGA GATCAACCGC
TCCTACCAAA CCGCACTAGA AACCTTAGCT ATCGGCCAGC AGCTCCACCC TGAGCAAAGT
AAATACCTCT ACGAGGATTA CTCTCTACAG GTATTGCTGT CGGCGTTAAA AGATAGCTGG
CGCGGTAAAG AGCTACTCTG CCCTTACCAA GCCCTCCTTA GCGCCGATAA AAATGGCCAG
CTAGTGAAAA CCCTGACTGC TTACCTGCAA CACTTTGGTG ACCTGCAGCA ATGTGCTAAT
GTACTTTTTA TTCATCGAAA TACCTTGCGC TATCGACTCG ATAAAATCCA ACAGATCACT
GGCGCCAATA TCAATCAACT CGATGGGTTA TTGCAGCTCT ATATAGGCCA AGTGATGCTT
AAGCAAACTT AA
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| Protein sequence | MYFLDGSLAR QIVNRTMKII GHNINVMNNH GVILGSGESH RIGAIHEGAL LAISQKRTVE
ISTHSTGTLQ GVKPGINLPL HYKGKVIGVI GITGEPEKLR SYGELLKMTA EIIVEQANTL
EQAQWQYRQK EELIIELIKS EGAFTSHQRN WASQLNIDLD APRVVAIIQV QADEEETTAN
SMLKQVMHLL ENPSRGNLVA MASMTELVIL KPAFLDGKTW DPNLESERID QLLIRLPKEL
NSRLKISLGH FFSNPEEINR SYQTALETLA IGQQLHPEQS KYLYEDYSLQ VLLSALKDSW
RGKELLCPYQ ALLSADKNGQ LVKTLTAYLQ HFGDLQQCAN VLFIHRNTLR YRLDKIQQIT
GANINQLDGL LQLYIGQVML KQT
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