Gene Spea_2698 details

Gene Information

• Locus tag: Spea_2698
• ID: 5663091
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 3294567
• End bp: 3296582
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641237340
• Product: decaheme cytochrome c
• Protein accession: YP_001502553
• Protein GI: 157962519
• TIGRFAM ID: [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0681671
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAATA CGAATAAATC TAAAATTGCG CTGCTTCTAG CAGCTGGTGC TGTCTCTATG 
GCCCTTACAG GCTGTGGTGG CGACGATGGT AACGACGGTA ATTCTGGCAA CCCTGGTGGC 
CCGGCTGCTG ATTACATCAA CACGCTTAAC CTAAAAGTGA CTGACGTTAC TTATACCGAT 
GGCGTTCCAA CAATCAATGT GTTTGCGACA AACGAAGAAG ACCTGCCTGT AGTTGGTCTA 
ACTGCGCTTG AAGTGAAAAA AGTTGTACAG CTTATCCCAC AAGGCGCTAC GGGTGCGGGT 
AACAGTGCAG AATGGCAAGC CACTTATAGC TCACCTCGTA ATGATGCTGA GAAGCTAAAG 
CCTGTAGATC TAAAGAATGG TAACTACAGC TTCACTATTC CAGTTGAAGG TTATAACTCT 
GAGCTAACTC AACGTTATAA CGTCATCGCC AGCGCTTCAA CACTCGCCGA TGGCGAAACA 
AGTGTGCCAC GCACTGAGCT GTCACAAGAC TTCTCAGGTG AAGGCTATGA AGCAACATAC 
ACTAAAGATG TCGTAGCGAC AGCAAGCTGT ACCTCATGTC ATGCTGAAGG CAAGAAGATT 
TACCACGGTT ATACCTCTTC TGAAACTTGT GCTGCTTGTC ATACACAAGA AATGGCCGAT 
GAAAAAGGTA AGCCACACGT AGCTTATAAC TTCCTTATTC ACAATGTTCA TAACAACATT 
GAAGAAGCAC ACCTACCTGA TGATGAAAAG CAAAACGAAT CTGCAGAAAA GGCATATGCT 
TTAATTCAAG ATAACTGTAC AACTTGTCAC ATAGCACCAA CCGAAGACAG CAACGAGCTA 
ACTGAATGGG GCAACTGGTC AAGCGTTCCA ACCATGGAAA CTTGTACAAG TTGTCATACA 
GGCATCGACT TTGTCGCTGG TAAGGGCCAC TCTCAACAAG CTGACAACTC AAACTGTATC 
GCTTGTCATA GTGCGAGCTG GACTGAAGAG CTGCATAACG AAGGCTTTGC TCAAAAGAAA 
GCTTTCATCG AGCAGTATGG GATGGTAGCA AGCTTAACTG CAGTAAAAAC TGACACCGGT 
AGCGATACCA CATTAAGTGT GACAATTACT GATGCAGCGG GCTCTGCAAT TGATGCAACA 
GCTATTGTGG ACAAAATCGA ACAACTAGAA ACCATCACTA ATGTTGGTCC TAATTACCCA 
ATCATGGGTT ACAAGCCTAA TCCAATAAAC GGTACCGAGA AAGTTGTTAT TAACTTAACC 
GAGGCGGATA TTGTTGATGG TAAATTCGTA ACGGTAATTA AAGATTTACC TTACGGTGAT 
GCTAAAACAG ATACTGACAC CGCGTTCACT TTAATCGGTC TATCTCTATG TAATGATGGT 
GAGACAGCTG TTAAGTGTGA AGAAGGTGTG TCACATACTA GTGTGAAGGC TGCTATGGCA 
CATGGCACAT TATCTGGAGA GGCACCAAGC GTACGTCATA CTGATTCAGT TAACTTCAAA 
GCGTGTGAAA GCTGTCATGG CACAGAATGG GAACTTCATG AGAAGTACCA TGCAGGCTTT 
GTGATGACAG AACAGCTTGG CCGTGAAAAT GCTGATGGTG AAACAGTTGT TGGCGTTGAT 
GCTTGTGCAA CTTGTCACAC GCCAGACGGA GTTGGTTATT CTGGTAACTC ACTAGCACTT 
GAAATGAGAC TTCATAAAAC GCATAAACAA GGTGACTATG CAGTTATTGC TGGCATGAAT 
TGTGATCAGT GCCATAGCGA CTTCAATCGT GATGCATTCA AAAATAAAGG TGCTATAGAA 
ACTTCTAGCG GTGCATACAG CACACCTATC GCTGCGACTT GTGTGTCTTG TCATAGTTAC 
AACCTAGACA GCTTTAAAGC CCACGCAGAA GGCCAAGGCG CGATTGTTAA TAACTCTGAA 
ATGACAAAAC AACAAATTAG CGATGCAGCT CAGCTAGAAA CTTGTTTCTA CTGCCATAAG 
CCAACTGCAG ACGATCACAC TTCTGTGAAG ATGTAA 

 

Protein sequence

MMNTNKSKIA LLLAAGAVSM ALTGCGGDDG NDGNSGNPGG PAADYINTLN LKVTDVTYTD 
GVPTINVFAT NEEDLPVVGL TALEVKKVVQ LIPQGATGAG NSAEWQATYS SPRNDAEKLK 
PVDLKNGNYS FTIPVEGYNS ELTQRYNVIA SASTLADGET SVPRTELSQD FSGEGYEATY 
TKDVVATASC TSCHAEGKKI YHGYTSSETC AACHTQEMAD EKGKPHVAYN FLIHNVHNNI 
EEAHLPDDEK QNESAEKAYA LIQDNCTTCH IAPTEDSNEL TEWGNWSSVP TMETCTSCHT 
GIDFVAGKGH SQQADNSNCI ACHSASWTEE LHNEGFAQKK AFIEQYGMVA SLTAVKTDTG 
SDTTLSVTIT DAAGSAIDAT AIVDKIEQLE TITNVGPNYP IMGYKPNPIN GTEKVVINLT 
EADIVDGKFV TVIKDLPYGD AKTDTDTAFT LIGLSLCNDG ETAVKCEEGV SHTSVKAAMA 
HGTLSGEAPS VRHTDSVNFK ACESCHGTEW ELHEKYHAGF VMTEQLGREN ADGETVVGVD 
ACATCHTPDG VGYSGNSLAL EMRLHKTHKQ GDYAVIAGMN CDQCHSDFNR DAFKNKGAIE 
TSSGAYSTPI AATCVSCHSY NLDSFKAHAE GQGAIVNNSE MTKQQISDAA QLETCFYCHK 
PTADDHTSVK M