| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2682 |
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| Symbol | tig |
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| ID | 5663075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3268300 |
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| End bp | 3269604 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237321 |
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| Product | trigger factor |
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| Protein accession | YP_001502537 |
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| Protein GI | 157962503 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000115435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAC CACACAAGGC CTAGAGCGTC GCCTAACAAT TTCTGTACCT
GCTGAGCAGA TCGAGAACAC TGTTAAAGAA GCATTAAAAA GCGAAGCTAA GCGTGCCCGT
ATCCCAGGTT TCCGTCCAGG AAAAGTACCT GTAAGCGTAA TTAATAAGCG TTATGGTAGT
GCAATTCGTC AAGATATCAT GGGTGAAGTG ATGCAGCGTA ACTTCGTTGA AGCAATCATT
GCTGAGAAGT TAAACCCAGC TGGCGCACCT ACATTAACTC CTGGTTCAAC TGAAGGCGAA
AACTTTGAGT TTGTTGCTAC TTTTGAAATC TACCCAGAAG TAGAGCTAAA AGGTCTTGAG
TCAATCACTG TTGAACAGCC TACTGCTGAA GTAACAGAAG CTGACGTTGA CGCTATGATT
GAAACGCTAC GTAACCAACA CGCTACTTTC GAAGTAGCAG ACCGCGCAGC GGCTGAAGGC
GACAAAGCTA AAATCAACTT CGTAGGTTCA ATCGATGGCG AAGAATTCGA AGGCGGTAAA
GCTGACGATT TCGAACTACA ACTAGGCAGC GGCCGTATGA TCCCAGGCTT CGAGTCTGGC
GTTGAAGGTC ACAAAGCTGG TGAAGAGTTC AACATCGAAG TGACTTTCCC AGAAGATTAC
CACGCTGAAA ACCTAAAGGG TAAAGTAGCG ACTTTCGCTA TCACTCTGAA CGAAGTTCAA
GCGGCTAACC TTCCAGAAGT TAACGACGAG TTCGCTACAC TATTCGGTAT TACTGAAGGT
GGCATCGACG CACTTCGCGC TGAAATCAGC AAGAACATGA GCCGTGAACT TGAGCAAGCG
CTTAAAGCTA ACGTTAAAGA GCAAGTTCTT AATGGTCTAG TTGAGCAAAA CGACATCGAA
TTGCCAACAG CACTTATCAA CGGTGAAGTA GAAGTATTGC GTAAGCAAGC TATGCAACGT
TTCGGCGACC AAGCTGCAAA CATGCCTGAG CTTCCAGCTG ACCTGTTCAC TGAACAAGCT
GCACGTCGCG TTAAAGTAGG TCTACTACTT GGCGAAGTGA TCAAGACTAA CGAGCTAAAA
GCTGAAGATG AACGCGTTCA AGGTTTGATC GCTTCAATGG CTTCTGCTTA CGAAGATCCA
AGTGAAGTTG TAGCTTACTA CAATGGTAAC GAAGAACTTA TGCAAAACAT GCGCAACGTT
GCTCTAGAAG AGCAAGCAGT TGAAGCTTTG TTAAAAACTG CAACTTTGAC TGAAAAAGCA
GTCAACTTTG AAGAATTTAT GAACAAGGCT ACAGGTCGCG CGTAA
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| Protein sequence | MQVSVETTQG LERRLTISVP AEQIENTVKE ALKSEAKRAR IPGFRPGKVP VSVINKRYGS
AIRQDIMGEV MQRNFVEAII AEKLNPAGAP TLTPGSTEGE NFEFVATFEI YPEVELKGLE
SITVEQPTAE VTEADVDAMI ETLRNQHATF EVADRAAAEG DKAKINFVGS IDGEEFEGGK
ADDFELQLGS GRMIPGFESG VEGHKAGEEF NIEVTFPEDY HAENLKGKVA TFAITLNEVQ
AANLPEVNDE FATLFGITEG GIDALRAEIS KNMSRELEQA LKANVKEQVL NGLVEQNDIE
LPTALINGEV EVLRKQAMQR FGDQAANMPE LPADLFTEQA ARRVKVGLLL GEVIKTNELK
AEDERVQGLI ASMASAYEDP SEVVAYYNGN EELMQNMRNV ALEEQAVEAL LKTATLTEKA
VNFEEFMNKA TGRA
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