| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2680 |
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| Symbol | clpX |
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| ID | 5663073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3266237 |
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| End bp | 3267514 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237319 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001502535 |
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| Protein GI | 157962501 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000314721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGAAG ACAAAGGTAA CGGTGACGGC GGAAAGCTGC TGTACTGCTC TTTTTGTGGC
AAGAGCCAGC ATGAGGTAAG AAAACTCATT GCTGGGCCTT CTGTATATGT TTGTGATGAG
TGTGTTGAAC TCTGCAATGA CATCATTAGA GAAGAGATTA AAGAGATCTC GCCAAAGCAA
GATCAAGACA AGTTGCCTAC GCCTCATGAG CTAAGAGCAC ACTTGGATGA TTATGTTATC
GGTCAAGATA AAGCTAAGAA GGTTCTTGCT GTTGCGGTGT ATAACCACTA CAAGCGCCTT
AGAAATGCTA GCCCTAAAGA TGGCGTAGAA CTTGGCAAGA GTAACATCTT GCTAATTGGC
CCAACGGGTA GTGGTAAAAC CTTATTAGCA GAAACGCTTG CACGTGTTCT TGATGTGCCA
TTTACTATGG CTGATGCAAC CACGCTTACC GAAGCGGGTT ACGTTGGTGA AGATGTTGAG
AACATCATTC AAAAGCTACT GCAAAAGTGT GACTACGACG TTGAAAAAGC GCAGCGCGGT
ATCGTGTATA TCGATGAAAT TGATAAAATC AGTCGTAAGT CTGATAATCC ATCAATCACA
CGTGACGTAT CGGGTGAGGG TGTTCAGCAA GCGTTGTTGA AACTGATCGA AGGTACTATC
GCTGCCGTGC CACCACAAGG TGGTCGTAAG CACCCTCAAC AGGAGTTCTT ACAGGTCGAT
ACCTCTAAGA TCTTGTTCGT TTGTGGTGGT GCATTCGCAG GTCTTGAAAA AGTGATTGAG
CAACGCGCTC ATGTCGGTAC TGGTATTGGT TTTGGCGCCC AAGTCAAAGG TGAAGCTGAT
AAGAAGACTA TCTCTGATAC ACTGTTAGAA GTGGAACCAG AAGATTTAGT TAAGTTTGGT
TTGATCCCTG AGTTTATTGG CCGTCTACCA GTACTTGCGA CACTGTCAGA ACTTGACGAT
GAAGCCTTGA TTCAGATCCT GTCTGAACCA AAGAATGCGA TTACTAAACA GTTTGCAGCA
TTGTTTGAGA TGGAAAATGT AGAGCTTGAG TTTAGAGACG ATGCGTTAAA GGCGATAGCC
CTTAAAGCAC AAACCCGTAA AACGGGTGCT CGTGGTCTTC GCTCTATCGT TGAAGGGATC
TTACTCGATA TCATGTATGA TCTACCATCG ACTGATGATG TGGCTAAGGT TGTTATCGAC
GAGTCAGTGG TTAAAGGCGA ATCTAGCCCA ATCTTGATCT ACGCTAATAA CGAAGCACAA
ACCGCCACGG CGGAGTAA
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| Protein sequence | MGEDKGNGDG GKLLYCSFCG KSQHEVRKLI AGPSVYVCDE CVELCNDIIR EEIKEISPKQ
DQDKLPTPHE LRAHLDDYVI GQDKAKKVLA VAVYNHYKRL RNASPKDGVE LGKSNILLIG
PTGSGKTLLA ETLARVLDVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTI AAVPPQGGRK HPQQEFLQVD
TSKILFVCGG AFAGLEKVIE QRAHVGTGIG FGAQVKGEAD KKTISDTLLE VEPEDLVKFG
LIPEFIGRLP VLATLSELDD EALIQILSEP KNAITKQFAA LFEMENVELE FRDDALKAIA
LKAQTRKTGA RGLRSIVEGI LLDIMYDLPS TDDVAKVVID ESVVKGESSP ILIYANNEAQ
TATAE
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