Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2656 |
Symbol | dinG |
ID | 5663049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3237346 |
End bp | 3239418 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237294 |
Product | ATP-dependent DNA helicase DinG |
Protein accession | YP_001502511 |
Protein GI | 157962477 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.765136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCCG CAGACGTTAA AACTCAAATT CGTACTATAT ATAAAGGCAT TTCTACATCT TTGCCTAACT TTCGCCCTCG TCGAGAGCAG AACTATATTG TTGCGGAAAT ATCAAAAACG CTTGCGGGTG AGTACGACAA GAATCGCCGA ATTATTGTGG TTGAAGCGGG CACGGGTATC GGTAAGTCGC TGGCTTATAT CCTCGGAACC ATTCCACTAG CACTCGCGAA TAAGAAAAAA GTCTGTATTG CCACGGCCAC AGTCGCGCTA CAAGAGCAGC TGTTGCATAA AGACCTGCCA TTTTTCCTAC AGCAATCTGG ACTCGACTTT AGCTTTGGTT TAGTTAAAGG CCGCCAACGT TATGTCTGCT TATCTAAACT CGAGATGCTC GTTGGCCCAG ATAACAGCAC CCAAATGGCG ATGTGGCAGA GCAAACCCGA TCAAAGCCAA GTGGATATGC TCGAAGCTCT GCTTAAGGAT TATCACTCAG GTGTATGGAA TGGCGAGCGA GATACGCTAA CCAAGCCGAT CCCCGATCAT CTGTGGCAAC AGATCGCCTG CGATAAGCAC AGTTGCCATC GCCAACTTGC CAGCCATCGT AACTGCCCTT TTCACAAGGC ACGAGAAGAT CTCGACACTT GGGATGTACT GATTGCCAAC CATAGTTTGC TTTTTGCCGA CCTAGAGCTG GGCGGCGGGG TTATTTTACC CGATCCCGAA GACCTATATT ACGTCATTGA TGAAGCACAC CACTTACCAA TAGTAGCAAG AGATTTTAGT AGCGCTCAAT CTACCGTGCG TGGTGCAAAC GATTGGCTTG AAAAGCTCAG CAAGACCACC AGCAAGTTAC AAAACCAAAT CAAGAGCAAC TACATTATCG CCCCGGCGCA AGCCATGCTG GATCATATTG GCGATATCAC AGGCCTTTTA AACCAAGTGG CTCAGTTTTG TGACTCCCAA TCAGCCAAAT TTGATAATCC AGAAAACCGC TTTAGATTCG AGCATGGCAA GTTACCGTCG GCATTATTAG TACAAGCCGA AAACCTTGCT ACCGCCTCCA ATGTGGCGCT AAAGCAGTTT AATAAGATGC TAACGTTGCT CAACGAAGCG ATAAAAGATG GTGACATTCC AAAGCACCAA TCGGAAGCCT TGCTATCTGA AACAGGTTTT ATGCTGCAAC GGTTAGAAAA TCTTCAGAAA CTTTGGAAGA TGATGGCCAA AGAGGATAGC CCCAAGGGTG CACCTATGGC CCGCTGGATT GAACAGCTTA CCGGTAAACA GGCCGACTAT CTCTTTAACG CATCCCCCAT CGAGGTCGGC TTTATGCTGG AAAACCTGTT ATGGGACAAA GCCGCTGGCG TGGTGCTATG TAGTGCGACC TTAAGAGCGC TAAATAATTT TAACCACTTC ACTCATCAAG TCGGCTTATC GATCAATGAC GGTAGTCGTT ACTTAGCGTT AGACTCGCCG TTCGATTTTG AGCAGAATGC GACACTATTC TTACCAAAGA TGGACAGTGA GCCAACGGAT GATAAATATA CCGATGAGCT GGCTAAACAT ATTATCGCTC TGGTTGAAGA TGAGATGGCA AGCTTAGTGT TATTCGCCTC GTACTGGCAG ATGGAAAAAG TGGCCGATCT GGTCGAAAGT AAAATTAAGA CAGGTCTACT TATTCAAGGC ACGGCACCAA GACAAGAGAT CTTAAAGCAG CATAAAGCCC GCTGTGATGA GGGTAAGCCG AGTATTATTT TTGGTACTGG CAGCTTCTCA GAAGGGCTCG ACTTGCCAGG GGATTATCTG ACTAACTTGA TCATCACTAA GCTACCATTT GCGGTTCCAA CCTCACCGGT TGAACAGGCG CACTCGGAAT ACATCAAAAT AAAAGGCGGA AACCCGTTTT TACAGCTTAC TATTCCCGAT GCTTCACGCA AACTGGTGCA AAGCTGTGGT AGATTATTAC GTAAAGAACA AGATTACGGC CGGATTTCCA TTTTAGATAG ACGTTTGGTG ACTAAACGCT ACGGCAAGTC TCTGCTAGAT GCCCTACCAC CTTTTCGCCG TGTGATTGAA TAG
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Protein sequence | MLSADVKTQI RTIYKGISTS LPNFRPRREQ NYIVAEISKT LAGEYDKNRR IIVVEAGTGI GKSLAYILGT IPLALANKKK VCIATATVAL QEQLLHKDLP FFLQQSGLDF SFGLVKGRQR YVCLSKLEML VGPDNSTQMA MWQSKPDQSQ VDMLEALLKD YHSGVWNGER DTLTKPIPDH LWQQIACDKH SCHRQLASHR NCPFHKARED LDTWDVLIAN HSLLFADLEL GGGVILPDPE DLYYVIDEAH HLPIVARDFS SAQSTVRGAN DWLEKLSKTT SKLQNQIKSN YIIAPAQAML DHIGDITGLL NQVAQFCDSQ SAKFDNPENR FRFEHGKLPS ALLVQAENLA TASNVALKQF NKMLTLLNEA IKDGDIPKHQ SEALLSETGF MLQRLENLQK LWKMMAKEDS PKGAPMARWI EQLTGKQADY LFNASPIEVG FMLENLLWDK AAGVVLCSAT LRALNNFNHF THQVGLSIND GSRYLALDSP FDFEQNATLF LPKMDSEPTD DKYTDELAKH IIALVEDEMA SLVLFASYWQ MEKVADLVES KIKTGLLIQG TAPRQEILKQ HKARCDEGKP SIIFGTGSFS EGLDLPGDYL TNLIITKLPF AVPTSPVEQA HSEYIKIKGG NPFLQLTIPD ASRKLVQSCG RLLRKEQDYG RISILDRRLV TKRYGKSLLD ALPPFRRVIE
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