| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2645 |
|---|
| Symbol | |
|---|
| ID | 5663038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3221500 |
|---|
| End bp | 3223332 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641237283 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001502500 |
|---|
| Protein GI | 157962466 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.301133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGG CGGTTCTTGC GTTGTCAATT GGCGCAATTT TAGGGTTAGC TGGCTGTGGT
GAAAATGATG CAAAGCAAAC ACAGGCACAA GAGCAAACGA GCCAAATAGC AGCTAACGAG
GCTGGTCAAG AGCAGTCAGC AGAGCAGGCT TACCTGTTAT TAGTGGACAA CTACTTTAAC
GATTTATTGA AGCTAGAACC TATCTACGCC ACTTTTGTTG GTGTTAATGA CTATAACGAC
CAATTTGGTG ATGGCTTATC ACATGCTTAT TTAACTGAGC GTCATCAACT TAATACTCGA
TACTTAAAAG AGGTCAAAAA AATTGATCGT GACCAGTTGT CAAATGAGTT AAAGCTTAGC
TACGACATGT TTAATTATGA TCGCAATGTT GCCTTGGCTG ATGAGACATT CCCTAATCAC
TTTATGCCGA TGAACCAGTT TTATAGCACT GTTATCAGCA TGGTACAGCT TGGCAGCGGT
GAAAGTGCTC AGCCGTTTAA CACCGTGGAA GACTACCGTA ACTGGGAAAA GCGTTTGCTG
GGATTTATTG ACTGGCTTAA GCTCGCCCAA GTTCGAATGA ATGAAGGCAT CGAGAGCAAA
GTCGTGTTAC CGCGTGTGCT TGTTGAACGC ATTATTCCTC AGCTGAGTGC GCAGTTAGTC
GATAACGTAG ACGATAGCTT ATTCTATACC CCGATCACCC TAATGCCTGA GTCTTTTTCA
GATACTGACA AGCAGGCCAT CACTGCAGAA TACACTAAGC TAATTGGTGA GCAGTTGATA
CCTGAGCTGA CTTCATTACG TAATTACTTC CAGAATACTT ATATCAAGTC GTCTCGTGCG
ACTGACGGTT GGTGGGGCCT TCCAAACGGT AAAGTTTGGT ATCAACATCT GGCTAACTCA
CATACGACAA CGACTATGCC AGTAGATGAA ATCCATAAGG TCGGTTTAGA TGAAGTTGCT
CGAATTTTAT CCGAAATGGA TAAGGTGCGT GTACAAGTTG ACTTTGAAGG AGACTTGAAC
GCATTTTTTG CATCATTATC TTCTGAGCCG CAGTACTTCT TTACAGAGCG TCAAGGCTTA
ATTGATGGCT ATATGGAGCT CAAAGAGCAA ATCAATGTTC AGATGCCTAA GTACTTCAAC
GTCATGCCTA AAGCTGATTA TGTGGTTAAG CCAGTAGAGA GCTTTAGAGA GCAATCGGCG
GCAGGCGCAT CTTATGATGC ACCTGCAGTA GATGGTTCAC GTCCTGGTGT ATTCTATATT
AATACCTATA ACCTGAAAGC GCAGCCTAAA TGGGGCATGA CCACTTTATC CCTGCATGAA
GCCGCTCCTG GTCATCACTT CCAAATTGCG ATTAAACAAG AGTTAACCGG TGTCCCAGAG
TTTCAACGCT TTGGCGGCTA CACGGCATTT GAAGAGGGTT GGGGACTCTA TGCTGAGTAC
TTAGGTATTG AGATGGGGCT GTTTAACGAT CCCTATCAAT ACTTTGGTAA GCTTTCTGAT
GAGATGCTAC GTGCAATGCG CTTAGTGGTG GATACTGGTC TGCATGCTAA AGGTTGGACG
CGTGAGCAAG CGATTCAGTA TATGAAAGAT AACTCGCCAA TGGCGGAGTC AGACATCATC
GCAGAAGTTG AGCGTTATAT GGCTATTCCT GGTCAAGCAT TAAGCTATAA AGTTGGCCAA
TTACAGATCT TAGCGCTGCG AGCAAAGTCG GAGCAGGAGC TTGGCGATAA GTTTGACTTA
AAAGCCTTTC ACGATCAGAT CCTAACTTCG GGTTCGCTGC CGATGGAAGT GATGGAGCTA
AAAGTGAACG ATTGGATTGC TTCACAAAAG TAA
|
|---|
| Protein sequence | MRKAVLALSI GAILGLAGCG ENDAKQTQAQ EQTSQIAANE AGQEQSAEQA YLLLVDNYFN
DLLKLEPIYA TFVGVNDYND QFGDGLSHAY LTERHQLNTR YLKEVKKIDR DQLSNELKLS
YDMFNYDRNV ALADETFPNH FMPMNQFYST VISMVQLGSG ESAQPFNTVE DYRNWEKRLL
GFIDWLKLAQ VRMNEGIESK VVLPRVLVER IIPQLSAQLV DNVDDSLFYT PITLMPESFS
DTDKQAITAE YTKLIGEQLI PELTSLRNYF QNTYIKSSRA TDGWWGLPNG KVWYQHLANS
HTTTTMPVDE IHKVGLDEVA RILSEMDKVR VQVDFEGDLN AFFASLSSEP QYFFTERQGL
IDGYMELKEQ INVQMPKYFN VMPKADYVVK PVESFREQSA AGASYDAPAV DGSRPGVFYI
NTYNLKAQPK WGMTTLSLHE AAPGHHFQIA IKQELTGVPE FQRFGGYTAF EEGWGLYAEY
LGIEMGLFND PYQYFGKLSD EMLRAMRLVV DTGLHAKGWT REQAIQYMKD NSPMAESDII
AEVERYMAIP GQALSYKVGQ LQILALRAKS EQELGDKFDL KAFHDQILTS GSLPMEVMEL
KVNDWIASQK
|
|---|
| |