Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2639 |
Symbol | |
ID | 5663032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3216799 |
End bp | 3217689 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237277 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001502494 |
Protein GI | 157962460 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACTCAC ACCTTCCGCC ATTAAATGCA CTTAGAGCCT TTGAAGCATC GGCTAGGCTG ATGAGCTTTA CCCTTGCTGG TAAAGAACTC TTTGTCACCC ATGGAGCCAT CAGCAAGCAG GTAAAGTTAT TGGAAGAGTT CGTGGGTATG CCGCTGTTTA TTAGGCAACA TCGTAGCCTT AAACTCACCG ATGAGGGCGA GCGCTACTTT ATTAATATCA AAGCAGCGCT GCATACGATT AACAACGCCA CTAGCGACTT GGTCACTCAA CCTCTGAGGA CTCAAACCTT GGCGATTAAT GTATTACCCA GCTTAACGAT TAGCTGGCTA ATACCTAGAA TGGAAGAGTT TAAGTCGCGC TATCCTCATC TGTATGTCGA CTTATCCATT GGTGACTTTG AAGTTGACTT TAACAGTGTT AATTACGATA TCGCCATTCG AAGCAGTACC ACAGTGCCAA AAGCGGCCAA TGTAATAACC TTAATGGATG AGGATCTCTG TCTGGTGTGC TCGCCTGATC TCGCCTGTAA TCTTAAAAAC CTTGAAGACG TAAACACCAT GACCTTATTA CAGCACACGA CAAGGCCGGG GCTATGGCAG TTATGGGCCA AGAGTGTTGG GCTTGAGCTA ACGACGGAAA AAAAGTTTGG TGTAGAGCAT TTTTATATGC TCAGCCAGGC GGCTGTAAGT GGTATGGGCG TAGCACTGAT CCCGCGCTTC TTTATTGAGG ATGAGCTTAA AATGGGCAGA CTGGTGATCC CATTCAATGC AGATTTCACC AGCCCTTATC GCTATTACTT ATTGACACCA AAATCGAGTA ACCTGCCGTT AAAAGTGCAA TCTTTTATCG ACTGGCTACT CGAACTATTT AGCCCATATA GGCAGCAATA G
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Protein sequence | MYSHLPPLNA LRAFEASARL MSFTLAGKEL FVTHGAISKQ VKLLEEFVGM PLFIRQHRSL KLTDEGERYF INIKAALHTI NNATSDLVTQ PLRTQTLAIN VLPSLTISWL IPRMEEFKSR YPHLYVDLSI GDFEVDFNSV NYDIAIRSST TVPKAANVIT LMDEDLCLVC SPDLACNLKN LEDVNTMTLL QHTTRPGLWQ LWAKSVGLEL TTEKKFGVEH FYMLSQAAVS GMGVALIPRF FIEDELKMGR LVIPFNADFT SPYRYYLLTP KSSNLPLKVQ SFIDWLLELF SPYRQQ
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