| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2633 |
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| Symbol | |
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| ID | 5663026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3204371 |
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| End bp | 3207427 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237271 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001502488 |
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| Protein GI | 157962454 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.158627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCGC TTACTCTAGA AATGTCTGCG TTCGGCCCAT TTGCATCGAC GCAAATAACC
GACTTTTCAG CGCTAGGCTC TAATCCGCTG TTTTTGATCA ACGGCCCAAC CGGAGCGGGT
AAAACCACGC TATTAGATGG CATCTGTTTT GCGCTATATG GCAAGACCAC GGGCGATGAG
CGTGAAGGCA GCCAGATGCG CTGTGACTTA GCCGCTGACA GCCTACTCAC CGAAGTGACC
TTCAGTTTTG CACTGGGCGA TAAGCAGTAC CGTATTCGAC GGGTACCAGA GCAGCAGCGA
GCTAAAAAGA GTGGCGATGG TTATACGGTG CAAAAACCAG AAGCGCAGCT ATACCGTATC
GATAGCGATG GCAGCGAGCA CTTGCTGGTG GCGAGTAAAG TTTCAGAGGC CACAGCTGAA
ATAGAGAGCC TGACAGGCCT TGATGCGGAT CAGTTTCGTC AGGTGATGGT GCTGCCACAG
GGCAAGTTCC GCGAACTATT AATGGCGGAC TCAAAAGACA GAGAGAAGAT TTTTAGTCAG
CTATTTCAGA CGCAAATCTA TCGTAAAATT GAAGACAAAT TAAAGTTCCA AGCATCTGCA
ATTAAGGCGG AAGTGCGCGA TCACCGTAAC AAGCGTGACG GCATGTTAGC CAACATTAGT
CTTGAATCGG ATGATGAACT GACACAAGAG CTCACAGAGC TTGAGCCTGA GCTTAACGCT
GCAGCGGCAT TAAAACAGCA AAGCCAGCAG GCGCTGATTG AGGCCAACAA GCAGTTTGAG
TCGGCTAAGA CATTAACTAA TGACTTTGAG GCGTTAGATA AGCTTAAGCA AACCGCTGTA
TTACTAGATG ATAAAAAGAA AGCCATCACC CAGCAGCAAG TAAGACTTGA GAGCGGCCAA
AAAGCACTGC AACTTAAACC TGTGCTTGAT GTGTCACTTG CCCGTGACGC AGAAGTGGCA
CAGGCCCAAG GCGCATGCGT TAATGCACAA GCGGCGAAAG AGCATAGCTC ACAAGCGTTA
TCGCTTAGCC AGGCTCAATT TGAAGCGCTA CCTGAGCAAG AGCAAAAGCT GCAACATGCA
CAAAGTGAGC TACAGCAATT AAGCAAATTA GAACCTCAGC TAAAAGGGCT CGACGCGCTT
CAAAATAACG TTAATCAAGC TTGCTTGCAG CTAGAGCAAG CCAAAGAGAA AGGCATTAAC
GAGAAAGGCC AGTTAGATGC GCTGCAAGTG CAAAAACAAC AAGCCGAGCA GCAGTTACCA
CAATTAGAGC AATTTGCAGC TGAGCAAGTT AATGCCCAAC AAGCATTGAG CGCCCAAACC
GATTTGATAG AGCGTTATCA GCTTTGGCAA CAAGCGAGTA TCGATGCGAG CCATACCGAG
CAGGCTTTAA CACTGGCAAA AGAGAAGGGC GGCCAGTTAC GCACCCGCTT TAATGAGGCG
CAAACTCAGC ATCGACAGTT ACAGCTTATT TGGCATCGGG GCCAAGCGGC CAGTTTAGCC
TTACAGCTAA GCCCAGGTTC GCCATGCCCG GTATGCGGCA GCGGTGAACA TCCAAACCCT
GCACAAAGCG CTGAGCAATT ACCAACAGAA GAGCAGCTGC AACAAGCACT GCAAGCTGAA
GAGTCGGCTA ATGAGTCGCT AAACCAAGCG CGGGCGGAAT ACTCAAGCCT TAATACTAAG
CATCAAGAGC AGTTAAAGCG CGCGGCTGAG CTATTGCAAA AAATTGGTGA TGCCAGTCAG
CAAACATTTG AAAACCTTCA ATCAGACTTG TTGCAACGAC AACAACAGCT TAAGCAGGCG
AATGCTGCTG CCGAGCAATT AACTCAGTTA AGAGGGCAAC TGCAACAGTG GCAAACTAAA
GAAAGAGCGC TACAAACTCA ACTCGATAGT GAGCGAGAGC ATTTTTCTGA ACAACAAAGC
TTGCTGGCGG AGCTGCAAGG TCAGTTTAAG CATGCATCAA CGGCCATTCC TGAGCAATAT
CGTAGCCTTG ATGCCTTAAA TGCTGCAATT GAGCAAGTTA ATGGGCAAAT TGCAGCTATG
CAGCAAGTGA TTAATTCGAC CCGCCAAAAC CATAGTCAGG CAGCCGAATT AGACGCGTCT
AACTCTTCGG CCTTAACTGC TGCGCAGTCG AGTCTGACGC AAGCGAAAGA GCGCAGTGAA
AAAGCGTTAA CGGAATTAAC GACTCAACTG TTAAGTGCAG GCTTTAGTGA TCAGCAAGCC
CTCGCTCAGG CCTTGTTATC TAATGACGAA CTTAAAGCGA TAAGCGAAGA GATTAGTCAC
TATCAGCAAG CGTGCACTGC AAATGACACC AGATTGACCG AACTACATGA AAAGTTAGCA
GAGCGAGTGA AACCTGAGCT AGATACGCTC GTAGCCGAGC TTAATGCTCT TCAAACACAG
CAGCAAGCGG CTGAAAATAC ATGGCAAACT CTGCAGACTC GAGTCACTCA ATTAAGCCAA
ACCCAAAAGC TGCTTAAAGA GGCCGATGCT AAAGCCAAGA AACTCGAAGA TGAGTATGGC
GTGATAGGGA CCCTATCTGA GGTCGCCAAT GGTCAAACGG GCAATAAAAT CAGCTTACAG
CGTTTTGTGC TTAGTGTGCT GCTTGATGAC GTATTGCTTG AGGCGAGTCA TCGTCTGCAA
TTGATGAGTA AAGGCCGCTA TCGTTTGTTA CGTAAAGAAG AGCGAGCTAA GGGTAACAAG
GCGTCAGGGC TTGAGTTAGA AGTTGAAGAT GCCTACACCT CTAAGGTGCG CCCAGTTGCG
ACACTCAGTG GTGGTGAAAG CTTTATGGCG GCCCTGTCTA TGGCACTAGG TTTATCCGAT
GTGGTGCAGG CTTATGCTGG TGGTATTAAG CTCGACACGC TATTTATTGA TGAGGGTTTT
GGCAGTTTAG ATCAAGACTC ACTCGATCTC GCTATTCGGA CCTTGATGGA TCTGCAATCT
TCCGGTCGTA TGATCGGGGT GATCTCCCAT GTGTCAGAGA TGAAGGAGCA GATAGGAACC
CGTATCGATA TCAATAAGAC CGCAGTGGGG AGTGAGGTGA GCATAGTACT GCCTTAA
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| Protein sequence | MRPLTLEMSA FGPFASTQIT DFSALGSNPL FLINGPTGAG KTTLLDGICF ALYGKTTGDE
REGSQMRCDL AADSLLTEVT FSFALGDKQY RIRRVPEQQR AKKSGDGYTV QKPEAQLYRI
DSDGSEHLLV ASKVSEATAE IESLTGLDAD QFRQVMVLPQ GKFRELLMAD SKDREKIFSQ
LFQTQIYRKI EDKLKFQASA IKAEVRDHRN KRDGMLANIS LESDDELTQE LTELEPELNA
AAALKQQSQQ ALIEANKQFE SAKTLTNDFE ALDKLKQTAV LLDDKKKAIT QQQVRLESGQ
KALQLKPVLD VSLARDAEVA QAQGACVNAQ AAKEHSSQAL SLSQAQFEAL PEQEQKLQHA
QSELQQLSKL EPQLKGLDAL QNNVNQACLQ LEQAKEKGIN EKGQLDALQV QKQQAEQQLP
QLEQFAAEQV NAQQALSAQT DLIERYQLWQ QASIDASHTE QALTLAKEKG GQLRTRFNEA
QTQHRQLQLI WHRGQAASLA LQLSPGSPCP VCGSGEHPNP AQSAEQLPTE EQLQQALQAE
ESANESLNQA RAEYSSLNTK HQEQLKRAAE LLQKIGDASQ QTFENLQSDL LQRQQQLKQA
NAAAEQLTQL RGQLQQWQTK ERALQTQLDS EREHFSEQQS LLAELQGQFK HASTAIPEQY
RSLDALNAAI EQVNGQIAAM QQVINSTRQN HSQAAELDAS NSSALTAAQS SLTQAKERSE
KALTELTTQL LSAGFSDQQA LAQALLSNDE LKAISEEISH YQQACTANDT RLTELHEKLA
ERVKPELDTL VAELNALQTQ QQAAENTWQT LQTRVTQLSQ TQKLLKEADA KAKKLEDEYG
VIGTLSEVAN GQTGNKISLQ RFVLSVLLDD VLLEASHRLQ LMSKGRYRLL RKEERAKGNK
ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF
GSLDQDSLDL AIRTLMDLQS SGRMIGVISH VSEMKEQIGT RIDINKTAVG SEVSIVLP
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