Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2619 |
Symbol | |
ID | 5663012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3187913 |
End bp | 3190030 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237257 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_001502474 |
Protein GI | 157962440 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGTGG TTATTAAACG GGATGGTTAC CGTACGCCTT TTGACGAAAC AAGGATTAAA GATGCCGTGA TAGCAGCTGC TAACTCGGTA GGTATTGAGT GCGCTGAATA TGCCCAACAA GTTGCAGAAA AAGTAAGTCA AACTGTCGCT GAATTAGAGG AAGTGAACAT TCACGATCTA CAAGATTCAG TTGAAAACTT GTTGATGGAA GGCCCACATA AATCATTAGC ACGTGTCTAC ATTGAATACC GTCACGATCG TGACGTTAAG CGCGAAGTCA GCAGCCGCTT AAACAAAGAG ATCCGTGGCC TGGTTGAGCA AAGCAATGCA GCTTTGTTAA ACGAGAACGC CAACAAGGAC TCTAAGGTTA TTCCGACTCA GCGAGATCTG TTAGCAGGTA TCGTGGCTAA GCATTATGCT AAGTGCCACA TCTTACCAAA AGATGTCGTT GCTGCTCACG AGTCTGGTGA GATCCATTAC CATGACTTAG ATTACGCGCC ATTCTTCCCA ATGTTTAACT GTATGCTTAT CGACTTAAGC GGCATGTTGA CCCAAGGCTT TAAGATGGGT AATGCCGAGA TTGAAACACC AAAATCAATC TCTACCGCGA CGGCCGTAAC GGCGCAAATT ATTGCTCAAG TGGCGAGCCA TATCTATGGC GGTACCACCA TCAACCGTAT CGACGAAGTG CTAGCACCGT TTGTTGCCAA GAGCTATGAC AAGCATTACC AAGTGGCACT GACTTGGGGC ATTACCGATG CCAAAGCTTT CGCGACAGCG CAAACCGAGA AAGAGTGTCA CGATGCATTC CAGTCACTCG AATATGAAGT GAACACCCTG CATACTGCGA ATGGCCAAAC GCCATTTGTG ACATTTGGAT TTGGTTTAGG TACCTCTTGG GAATCGCGCT TAATTCAACA ATCAATGATG AAAGTACGTA TCGCAGGTCT TGGTAAGAAT CGTAAGACTG CGGTATTCCC TAAGCTAGTA TTTGCTATCC GTGATGGTAT TAACCATAAA ACCGGTGATT GTAACTACGA CATCAAGCAG TTAGCACTTA AGTGTGCAAC GACTCGTATG TACCCTGATA TTCTTAACTA CGAACAAGTA GAAAGAGTCA CAGGCTCATT TAAGACGCCT ATGGGTTGTC GTAGCTTCTT AGGTACTTTC GAGCAAGACG GTGAGCTAGT ACACGAAGGC CGTAACAATC TAGGTGTTGT CAGTCTTAAC TTGCCACGTA TTGCCCTAGA AGCTAAGGGT GATGAGGCAG AGTTCTACCG CATCTTAGAT CAACGTCTAT TGATTGCTCG TAAGGGCTTA GATACACGTA TCGCACGTCT AGAAGGGGTT AAAGCTCGCG TAGCGCCAAT TCTTTATATG GAAGGGGCTT GTGGTGTACG TCTGCGCGCC GATGATGAGA TTTCTGAGAT CTTTAAGAAT GGCCGCGCGT CAATTTCACT GGGTTATATT GGCCTTCATG AAACTATCAA TGCACTCTAT GGCACCGAAG AGCACGTTTA CGACAGCGAA ATGCTGCGTG AAAAAGCTAT CGAAGTGATT AAGTACATGA AGCGAGCAAC TGAAAACTGG AAGAAAGAGT CTGGTTATGC ATTTAGCTTG TATAGCACGC CAAGTGAGAA CTTGTGCAGC CGTTTTTGCG CCCTAGACAC TAAAGTATTC GGTGTTGTTG ATGGCGTAAC GGCTAAAGGT TACTACACCA ACAGCTTCCA CTTGGATGTT GAGAAACAAG TTAACCCTTA CGACAAGATT GATTTTGAAC AGCCATACCC AGAGTTAGCT AACGGTGGCT TCATCTGTTA CGGCGAGTTC CCTAACATGC AAAATAACGT TGAAGCGTTA GAAGATGTGT GGGATTACAG CTACAGTCGA GTGCCTTACT ACGGCACGAA TACACCAATC GATGAGTGTT ATGACTGTGG CTATACCGGT GAGTTTAGCT GTACCAGCAA AGGTTTCACT TGTCCTAAAT GTGGCAACCA TGAACCAAGC CGTGTATCGG TCACTCGCCG CGTATGTGGT TACTTAGGTA GCCCTGACGC GAGACCGTTT AACTACGGCA AGCAAGAAGA AGTCAAGCGC CGCGTTAAGC ACCTGTAG
|
Protein sequence | MPVVIKRDGY RTPFDETRIK DAVIAAANSV GIECAEYAQQ VAEKVSQTVA ELEEVNIHDL QDSVENLLME GPHKSLARVY IEYRHDRDVK REVSSRLNKE IRGLVEQSNA ALLNENANKD SKVIPTQRDL LAGIVAKHYA KCHILPKDVV AAHESGEIHY HDLDYAPFFP MFNCMLIDLS GMLTQGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAPFVAKSYD KHYQVALTWG ITDAKAFATA QTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW ESRLIQQSMM KVRIAGLGKN RKTAVFPKLV FAIRDGINHK TGDCNYDIKQ LALKCATTRM YPDILNYEQV ERVTGSFKTP MGCRSFLGTF EQDGELVHEG RNNLGVVSLN LPRIALEAKG DEAEFYRILD QRLLIARKGL DTRIARLEGV KARVAPILYM EGACGVRLRA DDEISEIFKN GRASISLGYI GLHETINALY GTEEHVYDSE MLREKAIEVI KYMKRATENW KKESGYAFSL YSTPSENLCS RFCALDTKVF GVVDGVTAKG YYTNSFHLDV EKQVNPYDKI DFEQPYPELA NGGFICYGEF PNMQNNVEAL EDVWDYSYSR VPYYGTNTPI DECYDCGYTG EFSCTSKGFT CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NYGKQEEVKR RVKHL
|
| |