| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2609 |
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| Symbol | |
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| ID | 5663002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3177827 |
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| End bp | 3179146 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237247 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001502464 |
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| Protein GI | 157962430 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000112018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATAA TGAAGATTTT CAACAAGACT CTTATTGCTG TATCAGTAGC TCTAGTAAGC
ACTCAAACAA TGGCTGCTGG CTTCCAAATA AATAGCCAAT CAGCAACAGG TGTTGGCCGT
GCGTTTGCCG GTGATGCTGT AATCGCCGAT AACGCATCAG TACTTTCTCG TAACCCAGCT
GCTATGGCGT TGTTTGACGA AAAACAACTT TCAATGGGCT TAACTTATGC TGACGTACAA
GTTGAAGTTC AGGATGTATT TGTTAACTCA AATCTAGGTG AACTACACTA CGGCAATATC
GACGATGGCG CCGAAGCAAA AGTTATCCCT AATTTTTACT ATGTAAGCCC AGTAAACGAC
AAGTTCGCCT ACGGTGTTGC TATGTTCAGT AACTTCGGTA CAGGTACCGA TACAAGCGAA
CTATCACAGC CAAAATCGAT CCTTGGTGGC GCCGCGCAAA TTCCAGCGCC AGCCGATCTA
CTAGGTAAAA CTGAAGTCAC TACTATCAAC TTCAACCTAA GTGCCTCATA CCGCATCAAC
GATAACTTGA GTGTGGGTGC TGGTCTTGAT GTAATTTATG GCTCTGGCGT ACTAACGCGT
TCAGGTGAGC TTCCTGTAGC ACCTGATGGA TCTCTTGTAC CTGTAGACCT AGTTGATGTA
GATGCTGATG GCATCGCTTT TGGCGGTATT GTGGGTGCCG TATATGAAAT CAATGCAGAC
CACCGTTTTG GTGTCAGCTA CCGCTTCAGC CCAGAGTTTA CCGCTGATGG TACAGTAAAC
TACGCAGGTG TTGATTTCGA AGAGATCAAT ATTCCTCTTC CTGATATTTT CCAAGTTGCT
GGTTTCCACC AACTAACAGA AAAGTTTGCA CTGCACTATA CGGCGCAGAT GACGACTTGG
GGAGACTTCC ACGAAATTAC TGTTACTGAT CCTTCAGAAG CGCAGCTAAA GAAATATGCG
TGGGATGACT CATGGTTATT CAGTGTAGGT GGTACTTATA CTCTGAATGA CAGCTGGACA
CTACGTGCGG GTTACATGTT CGACCAAGGT GTTGTTGGTG AAGTGAGCTC TATCTCAATT
CCTGATTCAG ACCGTCAGTG GTACACTATG GGTGCAACTT ACAACCTATC TAAGCACACT
AGCCTAGATT TCGGTATTGC ATTCGTTCGT GGCGAAGAAA CTCAGCTAAC AGAACATAGC
TCAGTATTAG ACGCAGTGGG CCAAGAGATG CCAATCCTTG GTGCTGATTT AGGCACGGTG
CATGCGACAA CAACATCAAA TGCAACATAC TACTCTATTC AGTACAACTA CAAGTTCTAA
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| Protein sequence | MIIMKIFNKT LIAVSVALVS TQTMAAGFQI NSQSATGVGR AFAGDAVIAD NASVLSRNPA
AMALFDEKQL SMGLTYADVQ VEVQDVFVNS NLGELHYGNI DDGAEAKVIP NFYYVSPVND
KFAYGVAMFS NFGTGTDTSE LSQPKSILGG AAQIPAPADL LGKTEVTTIN FNLSASYRIN
DNLSVGAGLD VIYGSGVLTR SGELPVAPDG SLVPVDLVDV DADGIAFGGI VGAVYEINAD
HRFGVSYRFS PEFTADGTVN YAGVDFEEIN IPLPDIFQVA GFHQLTEKFA LHYTAQMTTW
GDFHEITVTD PSEAQLKKYA WDDSWLFSVG GTYTLNDSWT LRAGYMFDQG VVGEVSSISI
PDSDRQWYTM GATYNLSKHT SLDFGIAFVR GEETQLTEHS SVLDAVGQEM PILGADLGTV
HATTTSNATY YSIQYNYKF
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