| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2598 |
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| Symbol | fadJ |
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| ID | 5662991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3163542 |
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| End bp | 3165662 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237236 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001502453 |
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| Protein GI | 157962419 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA CATTTAATTT AGCTCGTCGT GATGATGGTA TTGCCATATT GACTATGGAC
GTACCAGGCG AAACCATGAA CACGCTTCGC AGCGAGTTTG GCCCTGAGAT CAGTGAGGTC
CTTGCCGAAA TTAAGGCCGA TGCCAGTATC AAAGGTCTTG TGTTAGTTTC TGGAAAGAAG
GACTCCTTTG TTGCGGGCGC AGATATTTCA ATGCTCGATG CCTGTGAAAC AGCCGCCGAT
GCTAAGCTGT TATCTCAGCA GGGGCACGTA GTATTTAACG AGTTAGAAAG CTTAACCATT
CCAGTGGTTG CTGCAATTAA TGGTGCTTGT TTAGGTGGCG GTTTGGAGCT GGCTCTGGCG
TGTCATCAGC GAGTTTGCTC CCTTAATCCA AAAACCATGA TGGGTGTGCC TGAAGTGCAG
CTAGGTTTGT TGCCTGGCGG CGGTGGCACT CAACGTCTGC CGCGTTTAGT TGGCGTAACT
ACTGCGCTAG ATATGATGCT GACAGGTAAA CAACTTCGTC CTAAGCAGGC AGTTAAGATG
GGCTTAGTCG ATGATGCTGT GCCTGAGTCA ATTTTGCTGC GCACAGCGGT AGAGATGGCA
TTAGCGGGAA AGCGTCCTGC TAAGAAAAAG AAACAGCCTT TTATCAACAA GTTGCTTGAG
GGCACGAGTG CGGGCCGTAA CATTATTTTC GATCAGGCTG GCAAACAAGT AGCGAAAAAG
ACCCAAGGTA ATTTTCCCGC ACCCGCGAAG ATCATCGACT GTGTATGCCA AGGTATGACT
AAAGGCATGG TAAAAGGGCT TGAGGTGGAA GCAAGTCATT TTGCTGAACT GGTAATGTCA
AAAGAGTCTG AGTCATTGCG CAGTATCTTC TTTGCCACCA CTGAGATGAA GAAAGAAACG
GGCGCTGGTG ATGTGAAGCC GCGTACAGTG AAAAAGGTCA TGGTGTTAGG CGGTGGTTTA
ATGGGGGGCG GAATTGCCTC TGTAACCACG ACTAAAGCTA AAATTCCTGC ACGGGTAAAA
GATATCAACG AAACAGGTTT AAGCAATGCA CTGTCTTATG CTTATAAGCT CTTAGATAAA
GGCGTTAAAC GTCGCCATAT GACCCCAGCA GTACGCGATA ACTTAATGGC GTTGATGACG
ACAACCACTG AATATAAAGG CATTAAAGAT GCCGATATGG TGGTAGAGGC TGTCTTTGAA
GATTTAGCTC TAAAACATCA GATGGTCAAA GATGTTGAAC GTGAGTGTGG CGAGAATACT
ATTTTTGCTT CGAACACTTC TTCTTTACCC ATTGGACAGA TTGCAGAAGC GGCGAGCCGA
CCAGAAAATG TCATCGGTCT GCACTATTTC TCGCCAGTCG AGAAAATGCC ATTAGTTGAA
GTGATTGCGC ATGCTAAAAC ATCGGCTGAA ACGATTGCGA CCACAGTGGC GTTCGCTAAG
AAGCAGGGAA AAACACCTAT CGTTGTTCAA GATGGTGCAG GGTTTTATGT TAACCGAATC
TTGGCGTTGT ATATGAACGA AGCCGCGCAG TTACTGCTTG AAGGGCAGAG CGTTGAGCAT
CTTGATAAGG CGTTAGTTAA GTTTGGTTTC CCTGTTGGCC CAATGACGTT ACTCGATGAA
GTGGGAATTG ACGTAGGCGC CAAGATTTCA CCTATCTTAG AGTCTGAGTT AGGGGAGCGT
TTTAAGGCGC CTGCAGCCTT CGATAAGCTT TTAGCCGATG ATAGAAAGGG GCGTAAGAAC
GGTAAAGGTT TCTACCTGTA TGGCGGTAAG AAAAAGACCA AAGAGGTCGA TCAAACTGTC
TATAGCGTTT TAGGGCTTAA GCCCGGTGTC GATACAGAAG CGTCTGAAGT GGCTCAACGC
TGTGTCGTTC AGATGCTAAA CGAAGCGGTA CGTTGTCTTG AGGAGAAGAT AATTGCTTGT
CCTAGAGATG GGGATATTGG CGCAATTTTT GGTATTGGTT TCCCGCCGTT CCTCGGTGGA
CCTTTTCATT ATATTGACAC GCTTGGAGCC GATCACTTGG TGAAAATTCT AGAGGGCTAT
CAAGCTCGTT ACGGTAATCG ATTTGAGCCT GCAGATACAC TAAAGCAAAT GGCTGCCGAC
GGGACTAGCT TCTTTAGTTA A
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| Protein sequence | MEKTFNLARR DDGIAILTMD VPGETMNTLR SEFGPEISEV LAEIKADASI KGLVLVSGKK
DSFVAGADIS MLDACETAAD AKLLSQQGHV VFNELESLTI PVVAAINGAC LGGGLELALA
CHQRVCSLNP KTMMGVPEVQ LGLLPGGGGT QRLPRLVGVT TALDMMLTGK QLRPKQAVKM
GLVDDAVPES ILLRTAVEMA LAGKRPAKKK KQPFINKLLE GTSAGRNIIF DQAGKQVAKK
TQGNFPAPAK IIDCVCQGMT KGMVKGLEVE ASHFAELVMS KESESLRSIF FATTEMKKET
GAGDVKPRTV KKVMVLGGGL MGGGIASVTT TKAKIPARVK DINETGLSNA LSYAYKLLDK
GVKRRHMTPA VRDNLMALMT TTTEYKGIKD ADMVVEAVFE DLALKHQMVK DVERECGENT
IFASNTSSLP IGQIAEAASR PENVIGLHYF SPVEKMPLVE VIAHAKTSAE TIATTVAFAK
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSVEH LDKALVKFGF PVGPMTLLDE
VGIDVGAKIS PILESELGER FKAPAAFDKL LADDRKGRKN GKGFYLYGGK KKTKEVDQTV
YSVLGLKPGV DTEASEVAQR CVVQMLNEAV RCLEEKIIAC PRDGDIGAIF GIGFPPFLGG
PFHYIDTLGA DHLVKILEGY QARYGNRFEP ADTLKQMAAD GTSFFS
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