Gene Spea_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2562 
Symbol 
ID5664791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3122035 
End bp3122760 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content42% 
IMG OID641237200 
ProductTol-Pal system YbgF 
Protein accessionYP_001502417 
Protein GI157962383 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.29972e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACG CCGTTTTATC AGCGGCAATT ATCCTAGTTG CAGGTTCTGC TTACGCAGCA 
CCTGCTCCTG TTGAGGATAT TGCTGGTGGC TCTACAGACG ATAGAGTTGC TCGTTTAGAG
CGAGTTATTA AAGCTAAGCA ACAAAGCGAA TTTCAAATGC AGCAGCGTTT AGAAACATTG
CAGCAAGAAG TTCTAGATTT ACGCGGACTA AGTGAACAGC AGTCATATCA AATTGAGCAG
ATGTTACAAA GACAGCGCCA ATTATATGAA GACATAGCTA ACCTCTCTTC AAAGCCTGCC
AATGCAGTCG TAGTTGATAC GACTAGTAGC ACACCTTCTG TATCTTCAAG CCTAGGTGAA
ACTGCAAGCT ATGAGCAAGC GGTCAATTTA GTGTTGAAAG AGAAAAAGTA CGAAGCTGCT
ATTCCTGCTT TTGCACAATT TATCCAGCGT TACCCAAATT CTAGCTACGC ACCTAATGCT
AATTATTGGT TAGGTCAGCT ACTTTATAAT AAGAGTGAGT TTGACGGAGC CTCTAAAGCT
TTTACTACTG TTGTTGAAAA ATACACCGAT TCGAGCAAGC GTGGCGAAAG CTTAGTCAAA
CTGGGTATGA TTGCAGAAAA GACGGGAGAT AAAGCTAAAG CTAAAGCTTA TTATCAAAAA
GTCACTCAGG AATATGCGAA CAGCGCTGCA GCCCGAATTG CGTTGCAGCA ACTTTCATCA
CTTTGA
 
Protein sequence
MKHAVLSAAI ILVAGSAYAA PAPVEDIAGG STDDRVARLE RVIKAKQQSE FQMQQRLETL 
QQEVLDLRGL SEQQSYQIEQ MLQRQRQLYE DIANLSSKPA NAVVVDTTSS TPSVSSSLGE
TASYEQAVNL VLKEKKYEAA IPAFAQFIQR YPNSSYAPNA NYWLGQLLYN KSEFDGASKA
FTTVVEKYTD SSKRGESLVK LGMIAEKTGD KAKAKAYYQK VTQEYANSAA ARIALQQLSS
L