| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2554 |
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| Symbol | |
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| ID | 5662947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3107611 |
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| End bp | 3108270 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237180 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001502409 |
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| Protein GI | 157962375 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.958854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCCTG AAAATTTAAA TATTATTATC GCCGACGACC ATCCATTATT TCGAAATGCG
CTTAGGCAAG CTTTATCGTC TGAGTTTAAA AATACACAAT GGTTTGAAGC AGATAGCGCC
GATGCGCTAC AAGTTCTACT CGAAAATAGC GACATTGAAT ATGATGTAGT GTTATTAGAT
CTACAGATGC CTGGCTCCCA TGGCTATTCG ACGCTGATCC ACCTAAGAAC TCATTTTCAA
GACTTACCTG TAGTCGTTAT CTCTGCCCAT GAAGATAGCC TCACTATCAG TCGTGCCATC
CACTATGGTA GCTCAGGCTT CATTCCAAAG TCTTCTTCGA TGGAAACCTT AGCCGAAGCT
CTAGAAGCTG TGTTATTTGG CGACGTTTGG TTACCCCAAG GTGTTGAACT CCAAGAGATC
GATGAAGATG ATACCAACCA GATGGCCAGC AAACTTGCCG ATCTCACCCC ACAGCAATAT
AAAGTCTTGC AAATGTTTGC CGAAGGCCTG CTCAATAAGC AGATCGCTTA TGATCTAGGG
GTGTCTGAAG CAACCATTAA AGCTCACGCA ACGGCAATAT TTAGAAAGCT AGGAGTAAGA
AACCGAACTC AAGCAGTGAT TGCGTTGCAA CAGCTAGAGA TGGAAAAGGT CGATATCTAA
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| Protein sequence | MKPENLNIII ADDHPLFRNA LRQALSSEFK NTQWFEADSA DALQVLLENS DIEYDVVLLD
LQMPGSHGYS TLIHLRTHFQ DLPVVVISAH EDSLTISRAI HYGSSGFIPK SSSMETLAEA
LEAVLFGDVW LPQGVELQEI DEDDTNQMAS KLADLTPQQY KVLQMFAEGL LNKQIAYDLG
VSEATIKAHA TAIFRKLGVR NRTQAVIALQ QLEMEKVDI
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