| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2543 |
|---|
| Symbol | |
|---|
| ID | 5662936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3094774 |
|---|
| End bp | 3095805 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237169 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase dimerisation region |
|---|
| Protein accession | YP_001502398 |
|---|
| Protein GI | 157962364 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGTTT TTAATCATAT CTCTTTCGAC GACCATGAAC AGGTCGTTTT TTGTCATGAT
AAAGAAAGCG GCTTAAAAGC CATTATCGCT ATCCACAACA CTAATTTAGG CCCTGCAGTT
GGCGGTTGTA GAATGTGGAA CTATGAGTCT GATGATGAGG CCATTACCGA TGTATTGCGT
CTATCTCGTG GCATGACCTA TAAAAACGCG CTAGCGGGTT TAGCTATGGG GGGGGGGAAG
TCAGTAATTA TCGCCGATCC AAAAGTACAA GATAGAGAAG CACTTTTTAG AGCATTCGGC
CGTTGTATCC ACACCTTAGG CGGCAAGTAT TACTCAGCTG AAGATGTTGG AGTTTCGACT
TCCGACATCA TGATTGCCCA TCAAGAAACC CCATATATGG CAGGTTTAGA GGGTAAAAGC
GGCGATCCAT CACCATTTAC AGCACTAGGT ACCTATCTAG GCATTAAAGC CGCTGTTAAG
CATCAGCGTG GGCTCGATAG CCTCAAGGGA CTAAAGATCT CAGTTCAAGG TGTTGGCCAT
GTAGGTTACT ATCTATGTCG CCATCTTCAT GCCGAAGGTG CAGAGCTAAT TGTGACAGAC
ATTCATCAAG CATCACTAGA CAGAGTCGCA GAAGAATTTG GTGCAACAGT TGTCTCCCCT
CAAGATATTT ATCATCAGGA TGTGGATGTC TACGCTCCTT GTGCGTTAGG CGCAACCATT
AATGACATAA CCATCCCACT GCTAAAAGCG ACAATTGTGG CAGGCTGTGC GAACAACCAA
CTTGGCGAAG TTCGTCACGG TGAGATGCTA AAAGACTTGG GTATTTTGTA CGCACCCGAT
TATGTTATTA ACGCAGGCGG GATCATCAAC GTATCTTTCG AGAAAGATTA CGATGCAACA
GCTGCTACTG CAAAAGTTGA AGAGATCTAC AATACCTTAC TGACGATTTT CGCCCAGTCT
GATGAGCAAG ACCGCACCAC TGGTGATGTA GCGGATGAAA TGGCACGAGC GATTATTCAC
GCTGCTAAAT AA
|
|---|
| Protein sequence | MAVFNHISFD DHEQVVFCHD KESGLKAIIA IHNTNLGPAV GGCRMWNYES DDEAITDVLR
LSRGMTYKNA LAGLAMGGGK SVIIADPKVQ DREALFRAFG RCIHTLGGKY YSAEDVGVST
SDIMIAHQET PYMAGLEGKS GDPSPFTALG TYLGIKAAVK HQRGLDSLKG LKISVQGVGH
VGYYLCRHLH AEGAELIVTD IHQASLDRVA EEFGATVVSP QDIYHQDVDV YAPCALGATI
NDITIPLLKA TIVAGCANNQ LGEVRHGEML KDLGILYAPD YVINAGGIIN VSFEKDYDAT
AATAKVEEIY NTLLTIFAQS DEQDRTTGDV ADEMARAIIH AAK
|
|---|
| |