| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2538 |
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| Symbol | mnmA |
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| ID | 5662931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3089471 |
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| End bp | 3090667 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237164 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001502393 |
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| Protein GI | 157962359 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTCG ATTGTAAATC CCATTCGTCG AGATACCGAT TCGCAGCAAT ATTCAGTAAA
CACAAGGTTT TTTTAGGATT TATGACGTCA ATCGAACCCA CTCATCTTGG TAAAAAAGTC
ATCGTCGGCA TGTCCGGTGG TGTTGATTCA TCAGTTTCAG CCTACCTGTT AATGAAACAG
GGTTACCAGG TTGAAGGCCT GTTCATGAAG AACTGGGAAG AAGATGACAC GGATGAATAT
TGCGCGGCAG CTGACGATCT TAAAGATGCG CAAGCTGTAT GCGACAAGCT AGGCATTAAA
TTGCACACGG TTAACTTTGC TTCAGAATAC TGGGACAACG TGTTCGAATA TTTCCTAGCC
GAATACAAAG CTGGCCGCAC GCCAAACCCA GATATCATGT GTAATAAAGA GATTAAGTTT
AAAGCTTTCC TCGAATTTGC AGATGAGATC TTAGATGCTG ACTATATCGC CATGGGCCAC
TATGTACGCC GCCGTGATAT CGATGGTACC AGTCAAATGC TACGTGGCGT CGACGGTAAC
AAAGATCAAA GCTACTTCTT ATATACCTTA GGCTACGAGC AAGTCGCTCG CTCATTGTTC
CCTGTTGGCG AACTAGACAA GAGCGAAGTG CGTGAAATAG CTAAAGAGAT GGGACTAATC
ACCCACGATA AGAAAGACAG TACTGGTATT TGCTTTATTG GTGAGCGTAA GTTTACCGAC
TTCTTACAGA CTTTCTTACC CGCTCAGCCA GGTAATATCG AAACTAGCGA AGGTGAAGTG
ATTGGTACTC ACCAAGGCTT AATGTATCAC ACACTAGGGC AACGTAAGGG TCTTGGCATT
GGCGGCTTGA AGAATAGCAA CGATGACCCT TGGTATGTTG TTGAAAAAGA CTTAGTCCGT
AACGTCTTGA TTGTTGGGCA AGGTGGTAAC CACCCTCGCC TAATGTCAAA TGGCTTAGTG
GCTAATCAGC TTCATTGGGT TGACCGTAAA GGACCAGCAA ACGGTTCAAA GATCACCGTT
AAGACTCGTT ACCGCCAACA AGATGTACCA TGTAGCGTAA CTTACGACAG CGATGATGTA
CTACGGGTTA TTTTCGATGA GCCAGTGGCT GCTGTAACAC CGGGACAATC GGCTGTTTTT
TATGATGGTG AAATCTGCCT AGGTGGCGGC ATTATTGACG CACTAATAAG AGATTAA
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| Protein sequence | MYLDCKSHSS RYRFAAIFSK HKVFLGFMTS IEPTHLGKKV IVGMSGGVDS SVSAYLLMKQ
GYQVEGLFMK NWEEDDTDEY CAAADDLKDA QAVCDKLGIK LHTVNFASEY WDNVFEYFLA
EYKAGRTPNP DIMCNKEIKF KAFLEFADEI LDADYIAMGH YVRRRDIDGT SQMLRGVDGN
KDQSYFLYTL GYEQVARSLF PVGELDKSEV REIAKEMGLI THDKKDSTGI CFIGERKFTD
FLQTFLPAQP GNIETSEGEV IGTHQGLMYH TLGQRKGLGI GGLKNSNDDP WYVVEKDLVR
NVLIVGQGGN HPRLMSNGLV ANQLHWVDRK GPANGSKITV KTRYRQQDVP CSVTYDSDDV
LRVIFDEPVA AVTPGQSAVF YDGEICLGGG IIDALIRD
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