Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2511 |
Symbol | |
ID | 5662904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3059563 |
End bp | 3060438 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641237137 |
Product | DNA ligase |
Protein accession | YP_001502366 |
Protein GI | 157962332 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCAA TTCGGTTTAT CAATTCATTT CTCAGGCTTT GTTTAATCAG CCTCATCACT GTCAATTATA GCTACGCCAA TAACACAGAC ATTCGAACTC CAAATAAACC TGCTATTCAA CTTGCATCTG CATTCGACGA GTCAATTTCG GATATAACGC AATACTTGGT GAGCGAAAAA CTCGATGGTG TTAGGGGCTA CTGGGATGGC AAAGTGATGT ACAGCCGTTC CGGCCGCCAA ATTGCATTAC CCGATTGGTT TGTAGCGGGC TTTCCTAGCT ACCCTTTAGA TGGTGAGTTA TGGATTAAAC GAGGGATGTT TGAGCAAGTA TCGGCAATGG TTAGAAGCTC CAAGGTGAGT GATGAAGAGT GGGCCAGAGT TAAATTTATG ATTTTTGACT TACCCGCCGA GTCCAGTGTT TTTGAATTGC GCTACCGAAA GGCTGTAAAA GAATTGGCTG GTATCAGTCC ATACTTAAAG GTGATTGGTC AAAATCAGTT CGATAGTTTT CAGGCGTTAG AGGCAGAGTT ACAGAAGGTC ATTGCGAAAA ACGGTGAAGG ACTCATGCTT CATAAGAAAC ATGCTTTTTA TAAATCAGGT CGTAGCAAAG ACATAGTTAA ACTAAAACCT TTTTATGATG CTGAAGCAAG AGTCATAGGT TATACGTCTG GTAAGGGGCG TTTTAGTGGC ATGATGGGAG CCTTGGTGGT TAAAAATCAG CAGGGGATCA CATTCAACTT AGGAACAGGG TTCAGTAAAG AACAAAGGCA GAGTCCACCA CAGATTGGCA GCTTAGTGAC ATATAAGTAT TACGGGCTGA CACAAAAAGG TACACCAAGA TTTGCGAGCT TTTTAAGGGT GAGACATGCT AAATAG
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Protein sequence | MLSIRFINSF LRLCLISLIT VNYSYANNTD IRTPNKPAIQ LASAFDESIS DITQYLVSEK LDGVRGYWDG KVMYSRSGRQ IALPDWFVAG FPSYPLDGEL WIKRGMFEQV SAMVRSSKVS DEEWARVKFM IFDLPAESSV FELRYRKAVK ELAGISPYLK VIGQNQFDSF QALEAELQKV IAKNGEGLML HKKHAFYKSG RSKDIVKLKP FYDAEARVIG YTSGKGRFSG MMGALVVKNQ QGITFNLGTG FSKEQRQSPP QIGSLVTYKY YGLTQKGTPR FASFLRVRHA K
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