| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2508 |
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| Symbol | rbgA |
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| ID | 5662901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3056971 |
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| End bp | 3057909 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237134 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_001502363 |
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| Protein GI | 157962329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC AGTGGTATCC AGGACACATG CACAAAGCAC GAAAAGAGAT CGAAGAGGTA
ATGCCTCAAG TCGATTTAGT GATCGAAGTG CTTGATGCAA GGATCCCTTA CAGTAGTGAA
AACCCTATGG TGCAAACACT ACGTGGTGAT AAACCATGTA TTAAACTACT GAATAAATCA
GACTTAGCCG ATCCAGAAAC AACGCAAAGA TGGATTGAAT ACCTCGAGCG CGAGCAAGGC
GTAAAGGCGA TGGCAATTAC TACATTACAA GCTGGACAGG TTAAAAAAAT CCCTGATTTA
TGTCGTAAGT TCGTACCAAG CCGCGACAAG ATCGAAAAAG ATATTCGTAC TATGATTATG
GGGATCCCGA ACGTGGGTAA ATCTACCATT ATCAATACTC TAGCCGGTAG AATGATTGCG
AAAACGGGTA ACGAGCCTGC GGTAACTAAA ACCCAACAAC GCATCAACTT ACGTAACGGT
ATCGTACTTT CTGACACCCC AGGTATTTTG TGGCCAAAAG TCGATAATGA AAAGAGCAGC
TACCGCCTAG CAGTCACTGG CGCGATTAAA GATACTGCGA TGGAGTATGA AGATGTTGCC
ATGTTTGCAG CCGAGTATTT CCTTACGGCC TATCCAGAAG CGATTGCTGA GCGTTACAAA
ATCAAGCAGA TGCCTGACAC AGACATTGAG CTACTAGAAG CGATTGGCCG TAACCGCGGC
GCCCTGCGCC CAGGTGGAAG AATCGATCTA CATAAGGCAT CAGAAGTGTT ACTACATGAT
TTTCGCGCAG GAAGAATTGG CCAGTTGTCG CTTGAGACGC CTGAAATGGC TGAAATCGAA
AAAGCTGAAG TGGCTAAACT ATTAGCAGAG AAAGAAGCAA AAGAGGAAGC TAAACGTGAA
CAAGAGCGTT TAAAGCGTTC CGGTAAGCGT TTAAGCTAA
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| Protein sequence | MAIQWYPGHM HKARKEIEEV MPQVDLVIEV LDARIPYSSE NPMVQTLRGD KPCIKLLNKS
DLADPETTQR WIEYLEREQG VKAMAITTLQ AGQVKKIPDL CRKFVPSRDK IEKDIRTMIM
GIPNVGKSTI INTLAGRMIA KTGNEPAVTK TQQRINLRNG IVLSDTPGIL WPKVDNEKSS
YRLAVTGAIK DTAMEYEDVA MFAAEYFLTA YPEAIAERYK IKQMPDTDIE LLEAIGRNRG
ALRPGGRIDL HKASEVLLHD FRAGRIGQLS LETPEMAEIE KAEVAKLLAE KEAKEEAKRE
QERLKRSGKR LS
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