Gene Spea_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2494 
Symbol 
ID5662887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3039750 
End bp3040496 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content44% 
IMG OID641237120 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001502349 
Protein GI157962315 
COG category[R] General function prediction only
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.2608e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAA GTTTTGATTT GACTGGTAAA GTAGCCTTAG TTACAGGCGC TAGCCGTGGT 
ATTGGACGCG CAGTTGCTGA AACATTAGTT TCAGCTGGCG CAGTCGTCAT CGGTACCGCG
ACCAGTGAGC GTGGGGCAGA AGCGATTCAA GCCTATTTAG GTGATAAGGG CCACGGTCTA
GTTTTAAACG TAACAGACGC AGACTCTGTA AAAGCATTGT TTGAAACGAT CAAACAAAGA
GCTGGTGATG TTGATATTTT AGTCAACAAC GCAGGTATCA CACGTGATAA TTTGTTAATG
CGAATGAAAG ATGACGAATG GAATGATATC CTAGATACTA ACCTAACATC TATCTTCCGC
ACCTCAAAAG CGGTGATGAG ACCAATGATG AAAAAGCGTC ATGGACGTAT TATCAATATT
GGCTCAGTTG TAGGTACAAT GGGTAATGCA GGGCAGACAA ACTACTCTGC AGCTAAAGCG
GGTCTGATTG GATTTACAAA ATCTCTTGCA AGAGAGGTTG CATCTCGTCA GATTACAGTT
AATGCTATTG CCCCTGGATT TATCCAGACA GATATGACGG ATGAGCTGAC GGAAGACCAG
CAACAAGCTA TTATGTCTCA GGTACCAATG GAAAGACTTG GTCAGGCGCA GGAAATTGCT
CACGCAGTCC TCTTTTTAGC GTCGGACTCT GCTGCTTACA TTACGGGAGA AACTCTCCAC
GTTAATGGTG GCATGTACAT GGTTTAA
 
Protein sequence
MSISFDLTGK VALVTGASRG IGRAVAETLV SAGAVVIGTA TSERGAEAIQ AYLGDKGHGL 
VLNVTDADSV KALFETIKQR AGDVDILVNN AGITRDNLLM RMKDDEWNDI LDTNLTSIFR
TSKAVMRPMM KKRHGRIINI GSVVGTMGNA GQTNYSAAKA GLIGFTKSLA REVASRQITV
NAIAPGFIQT DMTDELTEDQ QQAIMSQVPM ERLGQAQEIA HAVLFLASDS AAYITGETLH
VNGGMYMV