| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2484 |
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| Symbol | |
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| ID | 5662877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3030090 |
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| End bp | 3030995 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237110 |
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| Product | ABC transporter related |
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| Protein accession | YP_001502339 |
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| Protein GI | 157962305 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.013646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTAG TGAGTTGCAA GGGCTTATCT AAGTCCTACG GTGGTAAACA AGCCTTAAGT
CAAGTGAGCA TTACCCTAGA AGCTGGCAGC CCTATAGCAT TAGTTGGGCC TAATGGCGCA
GGTAAAACCA CTTTATTTAG CCTGCTGTGC GGATTTATCA CACCATCCTC AGGAGAAGTG
TCTTTACTAG GAGAAAAACC TGGCAGCGCT GCATTGCTAG GTAGAGTCGC CTCTCTTCCT
CAAGATGCTG CGCTCGATCC AAATCTTGAT ATCATCACTC AGCTAACGCT GTTTGCAAGT
CTACAGGGGT TTTCGGCTAA GGCGGCTAAA GCCGAAGGAC TAAGAGTTCT GACATTGGTC
GACTTGGTCG ACAGTGCACA GCAAAAGCCG AAATCATTAA GCCATGGTAT GTCGAAGCGT
GTTTCAATCG CTCAAGCTCT TATCGGCTCG CCTGAGTTAG TACTTCTCGA TGAACCAACA
GCAGGCTTAG ATCCTGCAAA TGCTAAGAAG ATCAGAGAAT TAGTTAAGAA ACTTTCCAAT
ACAACGACCT TCATCATCAG CTCACATAAT TTGGACGAAC TAGAAAAACT ATGTGATCAA
GTACTCTATC TTGAGCAAGG CCAACTAAGC CAATCGGTAT CAATGAAAGA GTCACTACAT
GAAGATTACT TGACACTTAC CATGCAACAA TGTGATGCAA GTGCCTTGAT CTCGGCGGTA
ATGGAGCTTG CCGACATTAG CTCTATCGAT GAGCGTCAAG CCAACCAGTT TTTAATTAAG
CATAATAGCG AAGAAACTTA TGCTATCGAA ATGGCTTTAC TCAGCTTATT TAAACAACAC
AATTGGCAAT ATAAGGCTAT CTTGAAAGGA CGCACCCTAG AGGAAAAGCT GTTTTCTCAG
CCTTGA
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| Protein sequence | MSLVSCKGLS KSYGGKQALS QVSITLEAGS PIALVGPNGA GKTTLFSLLC GFITPSSGEV
SLLGEKPGSA ALLGRVASLP QDAALDPNLD IITQLTLFAS LQGFSAKAAK AEGLRVLTLV
DLVDSAQQKP KSLSHGMSKR VSIAQALIGS PELVLLDEPT AGLDPANAKK IRELVKKLSN
TTTFIISSHN LDELEKLCDQ VLYLEQGQLS QSVSMKESLH EDYLTLTMQQ CDASALISAV
MELADISSID ERQANQFLIK HNSEETYAIE MALLSLFKQH NWQYKAILKG RTLEEKLFSQ
P
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