Gene Spea_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2477 
Symbol 
ID5662870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3022089 
End bp3022727 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID641237103 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001502332 
Protein GI157962298 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00062859 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGA TCAGTGGTAT CAGACGCGAA TACACATTAG GTGAATTACA TAATGAAGAG 
GTGCCTAGTG ATCCTATGGA CCTATTTAAC GCGTGGTTGG AAGTCATTCG TGACTCTGAC 
ATCAAAGATC CAACGGCTAT GTCGGTAGCG ACAGTCGATG AGAATGGCCA ACCTTTCCAA 
AGAATTGTAT TGCTCAAGCG ATTTGATAAC CATGGTTTTG TATTTTTTAC TAATCTTGAG 
AGCCGTAAGG CTCAGCACAT CGCTAATAAT GCGCAGGTTA GCATTCTATT CCCTTGGCAC 
AGTTTAGATA AGCAAGTAGC CGTTACCGGT ATTGCTGAAC CCTTATCTAA AACAGAGGTG 
CTTAAGTACT TTATGAGCCG GCCTAAGGAG AGCCAAATAG CCTCTTGGGT GTCTAAACAG 
TCGAGCCCTA TTAGCGCAAG AAAAGCACTC GAGAGTAAGT TTGCCGAAAT GAAAGCCAAG 
TTCTCTCAAG GTGATGTACC GCTGCCAAAA TTTTGGGGCG GTTATCTTGT TAGGCCAAAA 
AGTATTGAGT TTTGGCAAGG TGGGGAACAT CGTTTACACG ACCGATTCAT CTATACCAAG 
AAAGAAGAGA GCTGGGAGCA CACTCGTTTA GCTCCATAA
 
Protein sequence
MSEISGIRRE YTLGELHNEE VPSDPMDLFN AWLEVIRDSD IKDPTAMSVA TVDENGQPFQ 
RIVLLKRFDN HGFVFFTNLE SRKAQHIANN AQVSILFPWH SLDKQVAVTG IAEPLSKTEV 
LKYFMSRPKE SQIASWVSKQ SSPISARKAL ESKFAEMKAK FSQGDVPLPK FWGGYLVRPK 
SIEFWQGGEH RLHDRFIYTK KEESWEHTRL AP