Gene Spea_2469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2469 
SymbolpheT 
ID5662862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3010939 
End bp3013326 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content45% 
IMG OID641237095 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_001502324 
Protein GI157962290 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.228112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA GTGAATCTTG GCTTCGTGAG TGGGTTAACC CAAGCGTTAA TCGTGAAGAG 
TTAGCACACC AAATTACTAT GGCCGGTCTT GAAGTTGACG GCATTGAGCC AGTAGCTGCC
GAGTTTAGCG GTGTAGTTGT CGGTGAAGTC GTTGAGTGTG GCCAGCATCC AGATGCAGAC
AAATTACGCG TAACTAAAAT CAATGTCGGC GGCGAAGAGC TAATCGACAT CGTATGTGGT
GCGTCAAACT GTCGTCTAGG TCTTAAGGTT GCAGTCGCTA TGGTTGGCGC TGTGCTACCA
GGTGATTTCA AAATCAAAAA AGCCAAACTA CGTGGACAGC CATCATTTGG TATGTTGTGC
TCATTTGGCG AGCTTGGTGT AGATATTGAA AGTGACGGCA TTATTGAATT GCCACTTGAC
GCACCTGTTG GCCAAGACGT ACGTGAATTC TTAGATCTAA ACGATGCCAT TATTGATGTC
GATTTAACGG CTAACCGTGC AGATTGTCTA GGTATGGCAG GTCTTGCTCG TGAAGTAGGC
GTGTTAAACC GTCAATCGGT TACTGAACCG ACTTGGGATG CGGTTGAAGC GACAATTGCT
GATGCAGTTA CCGTTGATAT TCAAGAACCT CAAGAGTGTG GTCGTTACTT AGGCCGCGTT
ATCAAGAATG TTAACGTTAA GGCTGAATCA CCACTATGGA TGCAAGAGAA ATTGCGTCGT
AGCGGTATCC GCTCTATCGA TCCTATCGTC GATATTACTA ACTATGTATT GATTGAGTTT
GGTCAACCAA TGCACGCATT TGACTTAGCT AAGTTAGATG GCGGTATTGT GGTTCGTAAG
CCCAACGGCG AAGAGAAACT GACTCTACTT GATGGCAATG AAATCACTAT TCCTGAAGGT
ATGTTGATCA TTGCTGACCA CGCTAAGCCA TTGGCTCTAG CGGGTGTATT TGGTGGTGAG
CACAGCGGTG TGACCACAGA AACCACTGAT ATCGTACTTG AGTGCGCTTA CTTTGCACCG
CTAGCTATCT TAGGCAAGGC ACGTAAGATT GGTCTGCATA CTGATGCATC ACACCGTTTC
GAACGTGGTG TTGACCCAGA GCTACAACAG AAGGTTATGG ATCGTGCTAG TCGTTTAGTG
CTAGAGATCT GTGGTGGTGA AGCTGGCCCA GTTGTTGAAG CAAAGTCTGA AGAGAATCTA
CCTAAGCCTG TACAGATCGT ATTGCGCCGT AGCAAGCTAG ATAAGACTTT GGGTCATCAT
ATTGATGATG CTGAAGTTAA AGAAATTCTA GAGCGTTTAG GTTTCATCGT CGTAGTGAGT
GAAGGGCTGT GGAATGTAAC CACGGCAACT TACCGCTTCG ATATGGCAAT AGAAGAAGAC
TTGATTGAAG AAGTTGCCCG TATTTACGGT TACAACAACA TTCCAAATAT CGCGCCTATT
GCTCATTTAA GCATGTCTGA CCATAAAGAG TCGAACATCA ACATTAAGCG TGTTCGTAGC
ATGCTGGTTG CTCGAGGTTT CCAAGAAGCT GTGACTTATA GCTTTGTGGA TCCGAAGCAG
CAAGAGTTGA TTCACCCAGG TGCAGAGGCG ATGATTCTAC CGAATCCAAT TTCGGTTGAA
ATGTCTGCTA TGCGTCTGTC TATGTTCACC GGTCTTTTGA CTGCAGTTGG TTATAACCAA
AGCCGTCAGC AAAACCGTGT CAGACTGTTC GAAACAGGTC TACGTTTTGT ACCAAATGAA
ACAGCAGAGT CTGGTGTGTC ACAACAACCT ATGCTTGCTG CTGTTATTGC CGGTAACCAA
AATGACGAGC ATTGGACAAT GGAGTCAAAA ACCGTTGACT TCTTTGACCT AAAAGGTGAC
TTAGAAGCAG TCATCGGTTT GACTGTTGCT GATGCTGAAT TTAGTTTCAG ACCAGCAACT
CATCCAGCGT TACATCCGGG GCAATGTGCT GAAATCTTAA GAGATGATCG CGTTATTGGT
ATCATAGGTA CGGTTCACCC AAGCCTAGAG AAGCCATTTG GCCTAAACGG AAAAACAATT
ATTTTCGAGC TAGAATTAGA CGCTTTATTG CACGCTAATT TGCCGCTAGC CCAGACTGTA
TCTAAGTTTC CAGCTAACCG CCGTGATATC GCCATCGTAG TTGATGACGC TATTGCAGCG
AATGATGTTG TAAAAATGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG
TTCGATGTAT ACCGAGGTAA AGGTGTAGAG GAAGGCAAAA AGAGCCTTGC AATAGCACTC
TTATTACAAG ACAACGCTCG TACACTGGAA GAAAAAGAAA TCGCTGAGAT GGTAGACGTC
GTGGTTTCTG CTCTGAAAGA CGAGTTCAAC GCATCGTTGA GGGACTAA
 
Protein sequence
MKFSESWLRE WVNPSVNREE LAHQITMAGL EVDGIEPVAA EFSGVVVGEV VECGQHPDAD 
KLRVTKINVG GEELIDIVCG ASNCRLGLKV AVAMVGAVLP GDFKIKKAKL RGQPSFGMLC
SFGELGVDIE SDGIIELPLD APVGQDVREF LDLNDAIIDV DLTANRADCL GMAGLAREVG
VLNRQSVTEP TWDAVEATIA DAVTVDIQEP QECGRYLGRV IKNVNVKAES PLWMQEKLRR
SGIRSIDPIV DITNYVLIEF GQPMHAFDLA KLDGGIVVRK PNGEEKLTLL DGNEITIPEG
MLIIADHAKP LALAGVFGGE HSGVTTETTD IVLECAYFAP LAILGKARKI GLHTDASHRF
ERGVDPELQQ KVMDRASRLV LEICGGEAGP VVEAKSEENL PKPVQIVLRR SKLDKTLGHH
IDDAEVKEIL ERLGFIVVVS EGLWNVTTAT YRFDMAIEED LIEEVARIYG YNNIPNIAPI
AHLSMSDHKE SNINIKRVRS MLVARGFQEA VTYSFVDPKQ QELIHPGAEA MILPNPISVE
MSAMRLSMFT GLLTAVGYNQ SRQQNRVRLF ETGLRFVPNE TAESGVSQQP MLAAVIAGNQ
NDEHWTMESK TVDFFDLKGD LEAVIGLTVA DAEFSFRPAT HPALHPGQCA EILRDDRVIG
IIGTVHPSLE KPFGLNGKTI IFELELDALL HANLPLAQTV SKFPANRRDI AIVVDDAIAA
NDVVKMIRKV GENQLVGINL FDVYRGKGVE EGKKSLAIAL LLQDNARTLE EKEIAEMVDV
VVSALKDEFN ASLRD