Gene Spea_2455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2455 
Symbol 
ID5662848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2996985 
End bp2998910 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content45% 
IMG OID641237081 
Producthelicase c2 
Protein accessionYP_001502310 
Protein GI157962276 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGTTA GATTAACACA ACAAGTCGCT GCTGCATTTT CAAGCCAAGG TGTATTAGCA 
CAATCGATTA AAGGTTTCAG TCGTCGAGAT GTGCAAGCCG AGATGGCGCA CGCTGTAGCG
GAGTCCATTC ATAGTCGTAA AAAGTTGGTG GTTGAGGCTG GCACAGGTGT AGGTAAAACC
TTTGCTTATC TTATTCCCGC GCTATTAAGT GGCAAGAAAA TCATTATTAG CACCGGAAGT
AAAAACCTGC AAGAGCAGCT ATTTTACAAA GACTTACCAG CCTTGTCGGC CATGCTGAAC
CTAACGCCTA AAGTCGCTTT GCTAAAAGGG CGCAATAACT ATTTGTGCCA GCATTTGATG
GAGAAAGAGT TATCGGGTGC GAGTTCGATG GAGACTCAGG TATTAGACGA CCTGCTCAGA
ATTAATCAGT GGGGAGGCCA AACGACTGAC GGCGATATTG GTGGGTTGAC GGCAGTAACA
GAAAACTCTC CCGCGTTGCC GTTAATCGTC AGTAGTAAAG AGAACTGCAT TGGTCAGCGC
TGCGACTATT TTGATGAGTG CTTTACGCGT AAAGCCCGTA ATCGAGCCAT GAATGCTAAG
GTTACCGTCG TCAATCATCA TCTCTTTCTC GCCGATAGGA TCATAAAAGA AACCGGTTTT
GCCGAGCTAT TACCCGATTC TGATGTGGTG ATTTTTGACG AGGCGCATCT GCTTCCCGAT
ATCGCCGTAA CTTACTTTGG TCAGCAGTGT TCAACACGGC AACTCTCTGA GCTATTCGAT
AAGTTAATCG ATATTTATCG TCAAGAGCTT AGAGATGCCA AGCAGATAGA AGCACTCAGT
TCTCGTTGCG GCGCTATTTT AAACGAGTGG CATCAAATGT TGTTTGAACT GGGTGATAGC
GATTGGCGCC GCCTATTAGG CAACAAAGAG CTGTCTGTGT TGTCGTGGGC TTTAATTAAA
GAGATAAAAG TTCTGCAGAG TCTGTTGTTA GGCCATGTTG GACGCAGTGA TAACTTAGAC
GACACAATTG TAAAACTGGA GCTTATTACA AATAAGTTAG AGCTATTTTT CTTATGTGAG
AACAATCAGG CCGCTTACAG TATCGATTAC GGCCATCGCT ATTTAGTGTT GCGTATTGCA
CCTATTGATG TGGCTAAAGA GTGTCGCAAA CTGTTTGAAT CTGATGTTTC GTGGATCTTC
ACTTCGGCAA CCTTGCAAAT TAACCGTGAT TTGAGCTTGT TTACCAGACA ACTGGGCTTA
ACTCAGTGCC AAGAGATGTT ATTAGAGAGT CCTTTTGATT ACGCTAATAA TGCGCTCTTT
TGCGTGCCTC GGCATTTAGC CAGTGTGAGC AACCACCATG CTGCACTGTC ACAATTTGTC
GATGTCTGTG TTAAGGCGGT CAATGCCGCA AAAGGTCGGA CTTTCATCCT ATTTACAAGT
CACAGAATGC TAAACCTTGT TGCGCCCGCG CTGCAAAGAA GGGTTTCTTA TCCACTTTTG
GTGCAGGGGC AGGCAGGTAA GCAGAGCTTA TTGAAGAAGT ATCGTCAGCT TGGTAATGCG
GTATTGCTCG GTACTGGCGC CTTTTGGGAA GGGGTCGATG TACGTGGTCG TCTACTGAGT
TGTGTGATTA TCGATAAGCT GCCCTTTATC TCACCCGACG ATAATTTGTT TCGAGCGCGA
AGCGAAAGTA TCGAGCGAGA GGGTAAAGAT CCCTTCAGTG AAATATCCTT GCCACAAGCG
GTGATCACGT TAAATCAGGG CGTTGGCCGT TTGATCCGAG ATGAGAAAGA CAAAGGCGTG
CTTATTTTAT GTGACAACAG AATCGTTAAT AAGCCTTACG GACAGGCTTT TTTAAACTCT
TTACCTCCGA TGTCGAGAAC TCGAGACTTA GATAAGGCGA CAGCGTTTTT AGAGCGTATT
AAGTGA
 
Protein sequence
MSVRLTQQVA AAFSSQGVLA QSIKGFSRRD VQAEMAHAVA ESIHSRKKLV VEAGTGVGKT 
FAYLIPALLS GKKIIISTGS KNLQEQLFYK DLPALSAMLN LTPKVALLKG RNNYLCQHLM
EKELSGASSM ETQVLDDLLR INQWGGQTTD GDIGGLTAVT ENSPALPLIV SSKENCIGQR
CDYFDECFTR KARNRAMNAK VTVVNHHLFL ADRIIKETGF AELLPDSDVV IFDEAHLLPD
IAVTYFGQQC STRQLSELFD KLIDIYRQEL RDAKQIEALS SRCGAILNEW HQMLFELGDS
DWRRLLGNKE LSVLSWALIK EIKVLQSLLL GHVGRSDNLD DTIVKLELIT NKLELFFLCE
NNQAAYSIDY GHRYLVLRIA PIDVAKECRK LFESDVSWIF TSATLQINRD LSLFTRQLGL
TQCQEMLLES PFDYANNALF CVPRHLASVS NHHAALSQFV DVCVKAVNAA KGRTFILFTS
HRMLNLVAPA LQRRVSYPLL VQGQAGKQSL LKKYRQLGNA VLLGTGAFWE GVDVRGRLLS
CVIIDKLPFI SPDDNLFRAR SESIEREGKD PFSEISLPQA VITLNQGVGR LIRDEKDKGV
LILCDNRIVN KPYGQAFLNS LPPMSRTRDL DKATAFLERI K