Gene Spea_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2447 
Symbol 
ID5662840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2989575 
End bp2990684 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content41% 
IMG OID641237073 
Productribonuclease D 
Protein accessionYP_001502302 
Protein GI157962268 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.49434e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAGCGT TTCAATATAT TGAAGATGAT GCCAGTTTAG CGGCCCTTGT AGAGCAATAC 
CAAGATGCTG ATTTATTGGT GCTAGACACA GAATTTGTTC GTACTCGTAC CTATTATGCA
AGATTGGGCC TTATTCAAGC CTATGATGGT AAGACTCTTG CGTTAATCGA TCCATTAGCT
GTGAGTAACC TTGAATTATT TTGGCAACTG CTAAGCAAAG AAAGCAGCGT TAAGTTACTG
CATTCATGTA GTGAAGACTT AGAAGTGTTT GCACGCTATG GCAATTGCCA ACCTACTAAT
CTATTCGATA GTCAAATTGC TGCAGGTCTA GCTGGTATGG GGCATGGTCT AGGTTATGCC
AAGCTTGTAG AGCAAACTCT TGAAGTAAGC TTAGATAAAG GTGAGTCTCG CACCGACTGG
CTAAAACGAC CTTTGACAGA GGCGCAGCTC AACTACGCTG CCAATGATGT CTATTACCTT
TATAAGCTCT ACCCACAATT GGTTAAGTTA TTAGAAGAGC AGGGCAGACT AGATTGGGTC
TATGAAGAAG GCGTTCGTAT GACTCAAGGA CGTTTAGATA CTCCGGAACC TGAGACTGCC
TATTTAAAGG TTAAAAATGC CTTTCAGCTA TCCTCAAATC AGCTGGCTGT ATTGAGGGAT
TTATCTCAGT GGCGCCTAAA GCGAGCGTTA CAGAAAGATC TGGCTTTGGG CTTTGTGGTG
AAAGATCATG CTCTGATTGC CTTAGCTAAG AAGCAGCCTA AGTCAACCAA TGATCTCTTT
AAAATGACGG AACTCACGGA GCAGGAAAAG CGTATTCATG GTAAAGAGAT CATTAAGATC
ATTACCAATG TTAGTTACGA TAACCCGCCT AAGCCATTAG ATGTTATCGC TCTTAAAACC
GGTTATAAAA ACGCATTTAA GAGTATTAAA AACAGCATTA CAGAACAAGC AGAATCTAAG
AGTATCCCGT TAGAGTTATT AGGCTCTAAA AAGTATATAC ATGAATACTT ACAGTGGGTT
TGGGATGCTA AGAAAGGGAA TAAACCACTT ATTCTTACGG GTTGGCGAGA AGCGATAGTT
GCCGAGTCTT TATCAGCACT GAAGTTATAA
 
Protein sequence
MLAFQYIEDD ASLAALVEQY QDADLLVLDT EFVRTRTYYA RLGLIQAYDG KTLALIDPLA 
VSNLELFWQL LSKESSVKLL HSCSEDLEVF ARYGNCQPTN LFDSQIAAGL AGMGHGLGYA
KLVEQTLEVS LDKGESRTDW LKRPLTEAQL NYAANDVYYL YKLYPQLVKL LEEQGRLDWV
YEEGVRMTQG RLDTPEPETA YLKVKNAFQL SSNQLAVLRD LSQWRLKRAL QKDLALGFVV
KDHALIALAK KQPKSTNDLF KMTELTEQEK RIHGKEIIKI ITNVSYDNPP KPLDVIALKT
GYKNAFKSIK NSITEQAESK SIPLELLGSK KYIHEYLQWV WDAKKGNKPL ILTGWREAIV
AESLSALKL