Gene Spea_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2438 
Symbol 
ID5662831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2982409 
End bp2983128 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content43% 
IMG OID641237064 
Productfatty acid metabolism regulator 
Protein accessionYP_001502293 
Protein GI157962259 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID[TIGR02812] fatty acid metabolism transcriptional regulator FadR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.09997e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCA ATGCCAAAGG TCCTGCAAGC TTTGCAGAGA AGTATATTGT GCGATCCATA 
TGGGAAGATA AGTTTCCGCC AGGCTCTATT CTGCCCGCAG AACGCGAGCT TTCAGAACTG
ATTGGTGTAA CTCGTACAAC ATTACGAGAA GTGCTACAAC GTTTGGCTCG TGATGGATGG
TTGACGATTC AACATGGTAA GCCAACAAGA GTGAATAACT TTTGGGAAAC GTCTGGTTTG
AATATTTTGG AAACTATCGC CGAATTGAAT CCCGATGGTT TTCCTGAACT CGTTGACCAA
TTGCTATCTG CGAGAAGTAG CGTCAGTGCG ATCTATTTTA GAGGTGCTAT CCGTAACAAT
CCTGAAGAAG CGATAGAAGC CTTATCTCAT CTTTCTGAGC TTGAAGATAC GGCTCAAGCA
TATGCTGAGT TTGACTATCA GCTACAGCAC ACTTTAGCAT TTTCATCAGG AAATCCACTT
TACGTGTTAA TCTTGAATGG CTTTAAAGGT TTATATAGTC GAGTCGGGCG TTACTATTTC
TCAAGCGCTG AAGCCCGCGC ATTAGCAATG GATTTTTATA AGCAGTTGCA GCAACTTGCG
ATTGACAAAA ACTATACCGA CGTGCCGGCA TTAATGCGTA CTTATGGCAT TAATAGTGGT
GTGATGTGGC AGAGTCTTCG AGATGATATG CCTGTCGACT TAGGTTATTC AGATAACTAA
 
Protein sequence
MIINAKGPAS FAEKYIVRSI WEDKFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW 
LTIQHGKPTR VNNFWETSGL NILETIAELN PDGFPELVDQ LLSARSSVSA IYFRGAIRNN
PEEAIEALSH LSELEDTAQA YAEFDYQLQH TLAFSSGNPL YVLILNGFKG LYSRVGRYYF
SSAEARALAM DFYKQLQQLA IDKNYTDVPA LMRTYGINSG VMWQSLRDDM PVDLGYSDN