Gene Spea_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2400 
Symbol 
ID5662793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2926979 
End bp2928856 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content46% 
IMG OID641237022 
Productsodium/hydrogen exchanger 
Protein accessionYP_001502255 
Protein GI157962221 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.30765e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGC AGATCACTGC GATGCTTGCT TTGCTAGGTG TGTTATCGTT GTTTTGTCAG 
TGGATAGGGT GGAAATTGAG ACTACCTGCC ATTTTACCCC TGTTACTATG CGGCCTCCTG
CTTGGACCAG GTCTTGGTTT CTTACAGCCA GATGTTATTT TTGGCGACTT GTTGTTCCCT
ATCATCTCTC TTGGTGTTGC GGTCATTCTT TTTGAAGGTG CATTAACCCT TAACTTCAAA
GAAATAAAAG AGCACGGTGT TATGGTGACC CGCTTGGTGA CACTCGGCAC TGTGATCACT
TGGGCCTGTA TTACGGTCGG CACCTTCTAT CTACTCGATT TCGAATGGTC AATGGCGCTT
TTATTTGGTG CCTTGGTCGT GGTAACTGGT CCGACTGTTA TTGTGCCTAT GCTTCGAAGT
GTAAGACCAA AAACTGAACT TGCGAGTATA TTGCGCTGGG AAGGGATAGT CATCGACCCA
ATAGGTGCGC TGCTTGCCGT GTTGGTGTTT GAATATATCG CGGTTGCGGC CGACCCAACC
ACACATGTTC TGCATGCTTT AAGTGCCATG TTGGCCGTTG GTCTTGGCTT TGGTGTGATA
AGTGGCTATT TAGTTGGCCT CGTTTTGCGT AATAATCTAT TGCCACACTA TTTGCGTAAT
ACGGCTGTTC TCACCCTAAT GCTAGCGGTT TTCGTTGGCT CAAACCTATT ACAAGAAGAA
GCCGGTTTGC TCTCGGTGAC CGTGATGGGC ATTTGGCTGG CGAACATGAA AGGCGTGGAT
ATTGCCGATA TTCTCGAGTT TAAAGAGACC CTGACGGTAT TACTTATTTC TGCGTTGTTT
ATATTACTTG CGGCAAGACT CAATGCCGAT GCGCTGTTAA GCCTAGGCTG GGAAGGCTTA
GCACTACTCG CGGTGGTGAT GTTAATTGCA CGTCCCTTAA GTATCTGGTG TTGTGGCATC
GGTACCTCGC TTTCAAAGGG GGATAAATGG TTTTTAAGCT GGGTCGCACC ACGAGGTATT
GTCGCAGCGG CCGTGTCATC CTTATTTGCC ATTAAATTGG AAGCTATCGG CATTAAAGGC
GCGGAGCTTA TCGTACCTTT AGTCTTCCTC ATTATTATTG GTACTGTAGT GATCCAAAGC
TTAACTGCGG GGAGGTGGGC TAAGGTACTC GGCGTTACCG CAGACTCCTC TCAAGGGTTA
TTAATTTTCG GTGCATCCAA GTTTCCACGA GCACTGGCTA AAACATTGCA GTCAAAGGGG
GTCACTGTGC TGCTTGCCGA TAATAACTGG GATAATGTTC GCTTAGCCCG TATGGATAGC
ATTCCAGTAT ATTTCGGTAA TCCAGCATCG GAACACGCCG AGAATCATAT GAATATGGCG
GGAATAGGTC GAGTTCTGGT GATGTCGCCA TATAGGCAGC TTAATCCTCT CGTAACTTTC
TATTTTCAAG ATGTATTTGG TAGTAAAAAA GTTTTTGGAC TCAATAATGG TGAAATCTCA
AGTGCAAGGC ATCAATTATC TGAGTCTTAC TTGGAACGCT TAAGTTTATT TGGTGATGAT
GTCTCTTACT CTAAGCTCGC AAGCTTAATG GCAAAGGGGG CAACCATTAA AAGCACCCGT
CTCACTGAGA ACTTCAATTA CGCTATGTTT ATGAAGCAGT ATGCAGAAGC TGCCATCCCG
CTTATTTACC TGCAAGAGGG GAAGGTGAGG TTGATTAGCG GTGAACTTGA GATACCGATA
GGAGTCGAGT TAATCAGCTT AATCCCCGTG GATGCAATCA AGTTAGACTG TAACAGTGAC
AACCATCCTG ACACTGGGGA GACAAGTTCG ACTGTTATAG CTGATGAGAA TCTGGCTGTC
AGCAAGGCAC CTGAGTGA
 
Protein sequence
MLEQITAMLA LLGVLSLFCQ WIGWKLRLPA ILPLLLCGLL LGPGLGFLQP DVIFGDLLFP 
IISLGVAVIL FEGALTLNFK EIKEHGVMVT RLVTLGTVIT WACITVGTFY LLDFEWSMAL
LFGALVVVTG PTVIVPMLRS VRPKTELASI LRWEGIVIDP IGALLAVLVF EYIAVAADPT
THVLHALSAM LAVGLGFGVI SGYLVGLVLR NNLLPHYLRN TAVLTLMLAV FVGSNLLQEE
AGLLSVTVMG IWLANMKGVD IADILEFKET LTVLLISALF ILLAARLNAD ALLSLGWEGL
ALLAVVMLIA RPLSIWCCGI GTSLSKGDKW FLSWVAPRGI VAAAVSSLFA IKLEAIGIKG
AELIVPLVFL IIIGTVVIQS LTAGRWAKVL GVTADSSQGL LIFGASKFPR ALAKTLQSKG
VTVLLADNNW DNVRLARMDS IPVYFGNPAS EHAENHMNMA GIGRVLVMSP YRQLNPLVTF
YFQDVFGSKK VFGLNNGEIS SARHQLSESY LERLSLFGDD VSYSKLASLM AKGATIKSTR
LTENFNYAMF MKQYAEAAIP LIYLQEGKVR LISGELEIPI GVELISLIPV DAIKLDCNSD
NHPDTGETSS TVIADENLAV SKAPE