| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2383 |
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| Symbol | |
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| ID | 5662776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2904901 |
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| End bp | 2906904 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237005 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001502238 |
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| Protein GI | 157962204 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATC GCCGCGAAAC CCGTGCTCAA GCACAACAGT TTATTGATAA CCTAAAACCG
CTACAGCACC CAAATTCGGA GAAAGTTTAT CTTGAAGGCA GTCGCCCAGA TCTTAAAGTG
GGCATGCGTC AAATCCATCA AAGCGACACC TTAGTGGCTG GTGATGAAGC CAACCCCGTA
TTTGAAGCTA ACCCGCCGCT AAAAGTATAC GACTGCGCGG GCGCTTACTC AGATCCTGAT
GCAAATATTG ATGTACGCAA AGGTCTTGAA AAATTCCGTG AAAACTGGAT TGAAGAGCGT
GGTGATACTG TGCAGCTTAC AAGTGCCAGC TCAGGTTTTA CCCAGCAGCG CCTCGCAGAT
GATGGCTTAG ATCATCTAAG GTTCGAGTCG TTGCTGCCAC CACGCCGTGC AAAAGAAGGC
AAACGTGTCA CCCAATTGCA TTATGCCCGC CAAGGCATTA TTACCCCTGA GATGGAATAT
ATTGCCATAC GCGAGAATAT GGCCAAGTCT GAGGTAACCG ACCCTATTCT GACCCAAAAA
GATAAAGGTG AGAGCTTTGG CGCGGTGATT GGCGAGCCAA TTACCGCTGA ATTTGTCAGA
CAAGAAATTG CTCGTGGCCG CGCAATTATT CCTCTAAACA TCAACCACCC TGAAGCTGAG
CCAATGATTA TTGGTCGTAA CTTCTTAGTT AAAGTGAATG CCAATATTGG TAATTCGGCG
GTGACGTCAT CCATCGAGGA AGAAGTCGAG AAACTGGTTT GGTCGACCCG ATGGGGCGCC
GATACCGTGA TGGACTTATC TACTGGGCGA TATATCCACG AAACTCGTGA ATGGATTATT
CGTAACTCTC CTGTACCCAT TGGTACCGTG CCTATTTATC AAGCACTAGA GAAGGTTAAT
GGTGTTGCCG AAGATCTTAA CTGGGAAACG TTCCGCGATA CCTTAATCGA ACAAGCTGAG
CAGGGCGTTG ATTACTTCAC CATTCATGCC GGTGTATTAC TTCGCTATGT GCCGATGACC
GCTAAGCGCC TAACAGGCAT TGTTTCTCGT GGTGGCTCTA TCATGGCGAA ATGGTGTCTA
TCGCATCATA AAGAAAATTT CCTTTATGAG CATTTTAGAG AAATTTGTGA GATCTGCGCC
GCCTATGATG TGTCACTTTC ATTAGGCGAC GGCATGCGTC CAGGCTCGAT TGCCGATGCC
AACGATGAAG CCCAGTTCTC TGAGCTAGAA ACGCTTGGCA AGCTCGTTAA GGTTGCTTGG
GAATATGACG TACAAACTAT CATCGAAGGC CCTGGGCACA TTCCAATGAA CTTGATTAAA
GAGAACATGG ATAAGCAGCT TGAGGTGTGT GATGAAGCGC CGTTTTATAC CTTAGGCCCA
CAAACCACGG ATATTGCTCC TGGGTATGAC CATTTCACAT CGGGGATCGG CGCGGCAATG
ATCGCCTGGT ATGGCTGTGC AATGCTGTGT TATGTCACGC CTAAAGAGCA TTTAGGTCTG
CCTAACAAGG ATGATGTGAA ACAAGGGCTA ATCGCTTATA AGATTGCCGC TCATGCCGGT
GATGTGGCAA AAGGGCATCC GAGCGCCCAA ATACGTGACA ACGCATTATC AAAAGCGCGT
TTCGAGTTTC GCTGGGAAGA TCAATATAAC TTAGGGTTAG ATCCTGAGAC GGCGCGCGCA
TATCACGATG AGTCTTTACC TCAAGAGTCT GCCAAGGTCG CTCATTTCTG CTCTATGTGT
GGCCCTAAGT TCTGCTCAAT GAAGATTACC CAAGAGGTGC GTGATTATGC CGCAGCTCAG
GAGCGTGAGG CTGAGGCTAG AGTGATTGAT ATCAAATCTG CTACAGAGTA TGACTCATAC
ACTGGCAGTG AGTCTGATAC GGCAAAACGT GCATCGCAAA GAGAGCAAGG CATGGCGCAA
ATGTCGGCCG AGTTTAAAGC TAAAGGTGCT GAACTTTATC ATGAAGCGAG TCATAAACAG
CCTGATGTTG CGTTAGAGGA TTAA
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| Protein sequence | MSNRRETRAQ AQQFIDNLKP LQHPNSEKVY LEGSRPDLKV GMRQIHQSDT LVAGDEANPV
FEANPPLKVY DCAGAYSDPD ANIDVRKGLE KFRENWIEER GDTVQLTSAS SGFTQQRLAD
DGLDHLRFES LLPPRRAKEG KRVTQLHYAR QGIITPEMEY IAIRENMAKS EVTDPILTQK
DKGESFGAVI GEPITAEFVR QEIARGRAII PLNINHPEAE PMIIGRNFLV KVNANIGNSA
VTSSIEEEVE KLVWSTRWGA DTVMDLSTGR YIHETREWII RNSPVPIGTV PIYQALEKVN
GVAEDLNWET FRDTLIEQAE QGVDYFTIHA GVLLRYVPMT AKRLTGIVSR GGSIMAKWCL
SHHKENFLYE HFREICEICA AYDVSLSLGD GMRPGSIADA NDEAQFSELE TLGKLVKVAW
EYDVQTIIEG PGHIPMNLIK ENMDKQLEVC DEAPFYTLGP QTTDIAPGYD HFTSGIGAAM
IAWYGCAMLC YVTPKEHLGL PNKDDVKQGL IAYKIAAHAG DVAKGHPSAQ IRDNALSKAR
FEFRWEDQYN LGLDPETARA YHDESLPQES AKVAHFCSMC GPKFCSMKIT QEVRDYAAAQ
EREAEARVID IKSATEYDSY TGSESDTAKR ASQREQGMAQ MSAEFKAKGA ELYHEASHKQ
PDVALED
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