Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2351 |
Symbol | |
ID | 5662744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2863253 |
End bp | 2865256 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236966 |
Product | excinuclease ABC subunit B |
Protein accession | YP_001502206 |
Protein GI | 157962172 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00949955 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAGAAT CTGTATTTCA ATTAGAGTCC ATGTACAAGC CTGCAGGCGA TCAGCCAACG GCCATCAACA AGCTTGTTGA GGGACTCGAG TCCGGCGTTG CTTGCCAGAC ACTATTAGGT GTTACTGGAT CAGGTAAGAC TTTCACTGTA GCGAATGTTA TCGCAAAAAT GTCACGCCCA ACCATTATTA TGGCGCCCAA TAAGACGCTT GCTGCTCAGC TCTACGGGGA GATGAAAGAG TTCTTTCCCC ATAACGCCGT CGAATATTTC GTTTCTTACT ACGACTATTA TCAACCTGAA GCGTATGTTC CTTCAACGGG CACATTTATT GAGAAAGATG CATCGGTGAA TGCACACATT GAACAGATGC GCTTATCGGC CACCAAAGCC TTATTAGAGC GAAAAGATGT GGTGCTGATT GCCTCTGTAT CGGCGATTTA CGGCCTGGGC GATCCTAAAG CTTATATGAA GATGCTGTTA CACCTTCGAG AGGGTGGCAA TATGGAGCAG CGTGATATCT TAAAGCGCCT CAGTGAGCTG CAATACACCC GTAATGATAT TGAACTGCAG CGCGGTACTT ATCGAGTACG TGGTGAAGTC ATCGATATCT TTCCGGCAGA TTCGGACAAA AATGCCATTC GCATCGAGCT GTTTGATGAC GAGATAGAGC GCTTAAGCTT ATTCGACCCA CTTACTGGTC ATGTGGTAAA GCGAATCGCT CGGATCACCG TTTATCCTAA GAGTCATTAT GTGACGCCTA GAGAATCAAT TTTAGCGGCG ACAGAAGATA TTAAACAAGA GCTCAGAGAT CGTAAGAAGC AGCTACTTGA ACTCAATAAG CTGATAGAAG AGCAGCGCAT AACCGAACGT GTGCAGTACG ATGTTGAGAT GATGACTGAA CTTGGCTACT GCTCTGGCAT CGAAAACTAC TCCCGATACC TATCTGGGCG AGCTCCCGGC GATGGGCCTC CTACCTTGTT AGACTATCTG CCTGATGATG GTCTGCTGAT TATTGATGAG TCACATGTCA CAGTGCCGCA AATTGGCGCC ATGTATAAAG GTGACCGTTC GAGGAAGATG AACCTTGTTG AGTATGGCTT TCGTCTGCCT TCCGCACTAG ACAATCGTCC GCTTAAGTTC GAAGAGTTTG AAGCACTTAT GCCACAAAGC ATCTTTGTTT CAGCGACGCC AAGTGATTAT GAAATTGATA AGTCTGATGG GGAGATTGCC GAGCAGGTTG TGAGACCGAC TGGTCTGCTT GATCCTGAGA TTGAAGTGAG GCCTGTTGGT ATTCAAGTTG ATGATTTGCT TTCAGAAATT GGCAAGCGAG TCGCAGTGAA TGAGCGTGTG TTAGTCACAA CACTGACTAA ACGTATGTCT GAAGATCTCA GCGAGTATCT TGATGAGCAC GGTGTTAAAG TCAGATATTT GCATTCAGAT ATTGATACCG TTGAGCGTGT TGAAATCATT CGTGACTTAA GATTGGGTGT ATTCGATGTA CTTATCGGTA TCAACTTGCT ACGAGAAGGC TTAGATATGC CTGAGGTATC TTTAGTCTGT ATTCTCGATG CCGATAAAGA AGGTTTTTTA CGTTCTGAGC GCTCACTTAT TCAGACTATC GGTCGTGCGG CGCGAAACAT CAACGGTAAG GTGATCCTTT ACGGCGATCG AATCACTAAG TCGATGGATA AAGCGATAAC TGAAACTAAT CGTCGTCGTG AAAAACAGCA TCAATACAAT TTAGATAATG GCATCACACC TAAAGGTGTG GTTAAGCGCA TTACTGATGT TATGGACGTT GGCGATCATC AATATGTCGA TAGTGAGCGA GGCGTAGCGG AGAAAGAAGG GGGTTACCAT GTGGCTAAAC CTGCAGACAT CAGCCATGAC ATTGATAGGC TTGAAAAGCA GATGCATGAG CATGCTAAGA ACCTAGAGTT TGAAGAAGCT GCAGCTGTTC GCGATCAAGT CAGCCGACTC AGAGAGCAGT TTATAAAGGC TTAG
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Protein sequence | MSESVFQLES MYKPAGDQPT AINKLVEGLE SGVACQTLLG VTGSGKTFTV ANVIAKMSRP TIIMAPNKTL AAQLYGEMKE FFPHNAVEYF VSYYDYYQPE AYVPSTGTFI EKDASVNAHI EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPKAYMKMLL HLREGGNMEQ RDILKRLSEL QYTRNDIELQ RGTYRVRGEV IDIFPADSDK NAIRIELFDD EIERLSLFDP LTGHVVKRIA RITVYPKSHY VTPRESILAA TEDIKQELRD RKKQLLELNK LIEEQRITER VQYDVEMMTE LGYCSGIENY SRYLSGRAPG DGPPTLLDYL PDDGLLIIDE SHVTVPQIGA MYKGDRSRKM NLVEYGFRLP SALDNRPLKF EEFEALMPQS IFVSATPSDY EIDKSDGEIA EQVVRPTGLL DPEIEVRPVG IQVDDLLSEI GKRVAVNERV LVTTLTKRMS EDLSEYLDEH GVKVRYLHSD IDTVERVEII RDLRLGVFDV LIGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI GRAARNINGK VILYGDRITK SMDKAITETN RRREKQHQYN LDNGITPKGV VKRITDVMDV GDHQYVDSER GVAEKEGGYH VAKPADISHD IDRLEKQMHE HAKNLEFEEA AAVRDQVSRL REQFIKA
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