Gene Spea_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2348 
Symbol 
ID5662741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2861089 
End bp2861757 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content44% 
IMG OID641236963 
Productradical SAM domain-containing protein 
Protein accessionYP_001502203 
Protein GI157962169 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0536039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC CAGTTAATGA AGTGTTTGAA ACAATACAAG GCGAGGGGAC TCATACTGGA 
GTGCCAGCCA TTTTTGTTAG ACTTCAAGGC TGTCCTGTTG GTTGCTCTTG GTGCGACACT 
AAGCAGACTT GGGAATTGCT CGAGGATAAT CGAGTTGCAC CGGACTTAGT TATTCAAGTC 
GATGGAACTG TGGGTCGTTG GTCGGAGTTA ACTGTAGAGC AGTTAGTCAG TGCGTTTGAA 
GACAAGGGCT TTACCGCCAA GCTTGTTGTG ATCACAGGCG GTGAACCTTG CTTATATGAC 
TTGAGCGAAT TAACTCAATA TCTCCATGCC CAAGGTTATC AAACGCAGAT TGAGACCAGT 
GGAACCTTCG ATGTGCTTTG TCATCCAGAT ACTTGGGTAA CGGTATCACC AAAAGTGAAC 
ATGAAAGGCG GATATGCTGT ATTAGCTCAG GCACTTAATC GTGCTAATGA GATTAAGCAT 
CCAGTAGCGA CGCAAAAGCA CATCGATGAG TTAGATCTCC TGCTTGAAGA CATTAACTTA 
ACCGGTAAAA CCGTCTGTTT ACAACCCATT AGCCAGATAC CTCGTGCGAC AGAGTTGGCG 
ATGAAGACCT GTATTGAGCG TAACTGGCGT TTATCGGTTC AAACTCATAA GTACTTAAAT 
ATTGACTAG
 
Protein sequence
MKYPVNEVFE TIQGEGTHTG VPAIFVRLQG CPVGCSWCDT KQTWELLEDN RVAPDLVIQV 
DGTVGRWSEL TVEQLVSAFE DKGFTAKLVV ITGGEPCLYD LSELTQYLHA QGYQTQIETS 
GTFDVLCHPD TWVTVSPKVN MKGGYAVLAQ ALNRANEIKH PVATQKHIDE LDLLLEDINL 
TGKTVCLQPI SQIPRATELA MKTCIERNWR LSVQTHKYLN ID