Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2338 |
Symbol | |
ID | 5662731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2848256 |
End bp | 2850538 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236948 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001502193 |
Protein GI | 157962159 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.797755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACGA CATTATTAGT ACTGTTGCTT ATCGCAATAG TCGTTGTATT CAGCGTTAAA AACATCAGGA TGCAGTTAAT TACGCGTCCT GTATTTAGTT TTTTCAAAAA AGTATTGCCA CCACTTTCTG TTACTGAGAA AGAAGCGATG GAAGCGGGCG ATGTATGGTG GGAAGGCGAG CTATTTAAAG GCAAACCTAA CTGGCAGTTA CTTCACAGTT ACGGTAAACC GACGCTGACA TCAGAAGAGC AAGACTTTAT CGATAATCAA GTCATGACAG CATTAACTAT GATCGATGAT TACGACATAG TGAATAACAG AAAAGACTTA CCGCCAGAAC TTTGGCAATA CTTCAAGAAA GAAGGCTTCT TTGCGTTAAT CATTCCAAAA AAATATGGTG GTAAGGCGTT TTCGGCTTAC GCAAACTCGA CTATCGTCAG TAAGATTGCC AGCCGTAGCG TTAGCGCGGC AGTAACCGTT ATGGTACCTA ACTCATTAGG TCCTGGAGAG CTATTGACCC ATTATGGTAC TAGCGAACAG AAAGATTATT GGTTACCCCA ACTTGCCGAT GGCAGTGCCA TTCCTTGTTT TGCCTTAACG GGTCCAGACG CGGGCAGTGA TGCTGGTGCA ATTCCTGACA CTGGTATCGT TTGTCGCCAA GAGTTTAATG GGGAAGAAGT ACTCGGCCTA AAACTGAATT GGGATAAACG ATATATAACC CTTGCTCCTG TAGCTGATGT GCTCGGTCTT GCATTTCAGA TGTCCGATCC AGATGGCTTG TTAGGTGACA CAAAACATAT CGGCATCACC TGTGCGTTAA TTCCAACTGA TCATGAAGGC GTCGAGATTG GTAGTCGTCA TAATCCGCTC AATATGGCGT TTATGAATGG TACGACCCGA GGTAAAGATG TGTTTATTCC ATTGGATTGG ATCATCGGTG GCCCTCAATA TGCGGGACGC GGCTGGAGAA TGCTAGTTGA GTGTTTGTCG GCTGGTCGTG GCATTTCACT ACCCGCTTTA TCAACCGCTT CAGGCCATAT GGCTACCAAG ACGACGACGG CCTACAGCGC AGTGCGTCAG CAGTTTGGTC TGGATATTGG TCAATTTGAA GGGGTGCAAG AGGCACTTGC TCGTGTGATT GCCAATACGT ATCAACTTGA AGCCGCAAGA CGTTTAACCA CCACCGGCAT CGACTTAAAG GTTAAGCCGT CAGTTGTGAC CGCAATTGCT AAATATCATA TGACTGAGCT TGGTCGAAAG GTGATTGATG ATGCGATGGA CATTCAGTCG GGTAAGGGCA TTCAGCTTGG ACCTAAGAAT TATCTAGGCC ATGGTTATAT GGCGCTGCCA ATCTCTATCA CGGTAGAAGG GGCAAATATT CTAACCAGAA GTTTGATGAT TTTCGGCCAA GGGGCAACAC GTTGTCACCC TTATGTGCTA GCTGAGATGG AAGCGGCGGG AATGCAAGAC ACCAGTGAAG GCCTTGAGCG TTTCGATGAC TTGTTACTGG GACATATTGG CTATGCGACT CGTAATGCCT TTAGCGCGTT AGGTAATGCC TTGACTGGCA GCCGTTTTGC TCAATCACCA GTGAGTGGTG AAACCAAGCA GTATTATAAA GACATGACGC GTTTATCTGC TGGCTTAGCC TTGATGACAG ATGTTTCTAT GCTTATTCTT GGCGGCGATC TGAAACGTAA AGAGATGCTA AGTGCACGTA TGGGCGATGT GTTAAGTCAG CTATATCTTG GTTCTGCGAC CTTAAAACTT TTTGAAGATA ATGGTCGTCA GTTTGATGAC TTACCAGCGG TACGCCACGT TATGGCTACC CGTCTTCACT TAGCGGCAAA AGCGTTAGAT GAAGCGATTC GTAACTTCCC AAATCGCGGG GTTGCATTGC TGCTGCGTGC ATTAATCTTC CCGCTTGGTA ACCGATTTAA AGATGCGAGT GATAAGCTAT CGATTGATTT GGCCAATGCG ATGAATAAGC AAGGTCCAGC TCGTGACAGG TTAACTTTCT TGTGCCCAAG TTTTGATGGG GATACAAGTG GTATTACCGA AGTTGAAAAT GCCTTTATTG CTAAACATGG GTGCAAAGGG CTGTATAAGA AGCTTAAGCA AGCACAGAAA GAGGGCAGCT TACCGAAGAA GTTGCCAGCA GTGGCATTGT TTGGCGCTGC ATTGGAGATC TCGTTAATCT CAGAGCAAGA GCACCAAAAC TTGATTAAAG CTGATGAGCT GCGCTTAGCT GCTATCGCTG TTGACGAGTT CGATAAACTT TAA
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Protein sequence | MATTLLVLLL IAIVVVFSVK NIRMQLITRP VFSFFKKVLP PLSVTEKEAM EAGDVWWEGE LFKGKPNWQL LHSYGKPTLT SEEQDFIDNQ VMTALTMIDD YDIVNNRKDL PPELWQYFKK EGFFALIIPK KYGGKAFSAY ANSTIVSKIA SRSVSAAVTV MVPNSLGPGE LLTHYGTSEQ KDYWLPQLAD GSAIPCFALT GPDAGSDAGA IPDTGIVCRQ EFNGEEVLGL KLNWDKRYIT LAPVADVLGL AFQMSDPDGL LGDTKHIGIT CALIPTDHEG VEIGSRHNPL NMAFMNGTTR GKDVFIPLDW IIGGPQYAGR GWRMLVECLS AGRGISLPAL STASGHMATK TTTAYSAVRQ QFGLDIGQFE GVQEALARVI ANTYQLEAAR RLTTTGIDLK VKPSVVTAIA KYHMTELGRK VIDDAMDIQS GKGIQLGPKN YLGHGYMALP ISITVEGANI LTRSLMIFGQ GATRCHPYVL AEMEAAGMQD TSEGLERFDD LLLGHIGYAT RNAFSALGNA LTGSRFAQSP VSGETKQYYK DMTRLSAGLA LMTDVSMLIL GGDLKRKEML SARMGDVLSQ LYLGSATLKL FEDNGRQFDD LPAVRHVMAT RLHLAAKALD EAIRNFPNRG VALLLRALIF PLGNRFKDAS DKLSIDLANA MNKQGPARDR LTFLCPSFDG DTSGITEVEN AFIAKHGCKG LYKKLKQAQK EGSLPKKLPA VALFGAALEI SLISEQEHQN LIKADELRLA AIAVDEFDKL
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