Gene Spea_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2338 
Symbol 
ID5662731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2848256 
End bp2850538 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content46% 
IMG OID641236948 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001502193 
Protein GI157962159 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.797755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACGA CATTATTAGT ACTGTTGCTT ATCGCAATAG TCGTTGTATT CAGCGTTAAA 
AACATCAGGA TGCAGTTAAT TACGCGTCCT GTATTTAGTT TTTTCAAAAA AGTATTGCCA
CCACTTTCTG TTACTGAGAA AGAAGCGATG GAAGCGGGCG ATGTATGGTG GGAAGGCGAG
CTATTTAAAG GCAAACCTAA CTGGCAGTTA CTTCACAGTT ACGGTAAACC GACGCTGACA
TCAGAAGAGC AAGACTTTAT CGATAATCAA GTCATGACAG CATTAACTAT GATCGATGAT
TACGACATAG TGAATAACAG AAAAGACTTA CCGCCAGAAC TTTGGCAATA CTTCAAGAAA
GAAGGCTTCT TTGCGTTAAT CATTCCAAAA AAATATGGTG GTAAGGCGTT TTCGGCTTAC
GCAAACTCGA CTATCGTCAG TAAGATTGCC AGCCGTAGCG TTAGCGCGGC AGTAACCGTT
ATGGTACCTA ACTCATTAGG TCCTGGAGAG CTATTGACCC ATTATGGTAC TAGCGAACAG
AAAGATTATT GGTTACCCCA ACTTGCCGAT GGCAGTGCCA TTCCTTGTTT TGCCTTAACG
GGTCCAGACG CGGGCAGTGA TGCTGGTGCA ATTCCTGACA CTGGTATCGT TTGTCGCCAA
GAGTTTAATG GGGAAGAAGT ACTCGGCCTA AAACTGAATT GGGATAAACG ATATATAACC
CTTGCTCCTG TAGCTGATGT GCTCGGTCTT GCATTTCAGA TGTCCGATCC AGATGGCTTG
TTAGGTGACA CAAAACATAT CGGCATCACC TGTGCGTTAA TTCCAACTGA TCATGAAGGC
GTCGAGATTG GTAGTCGTCA TAATCCGCTC AATATGGCGT TTATGAATGG TACGACCCGA
GGTAAAGATG TGTTTATTCC ATTGGATTGG ATCATCGGTG GCCCTCAATA TGCGGGACGC
GGCTGGAGAA TGCTAGTTGA GTGTTTGTCG GCTGGTCGTG GCATTTCACT ACCCGCTTTA
TCAACCGCTT CAGGCCATAT GGCTACCAAG ACGACGACGG CCTACAGCGC AGTGCGTCAG
CAGTTTGGTC TGGATATTGG TCAATTTGAA GGGGTGCAAG AGGCACTTGC TCGTGTGATT
GCCAATACGT ATCAACTTGA AGCCGCAAGA CGTTTAACCA CCACCGGCAT CGACTTAAAG
GTTAAGCCGT CAGTTGTGAC CGCAATTGCT AAATATCATA TGACTGAGCT TGGTCGAAAG
GTGATTGATG ATGCGATGGA CATTCAGTCG GGTAAGGGCA TTCAGCTTGG ACCTAAGAAT
TATCTAGGCC ATGGTTATAT GGCGCTGCCA ATCTCTATCA CGGTAGAAGG GGCAAATATT
CTAACCAGAA GTTTGATGAT TTTCGGCCAA GGGGCAACAC GTTGTCACCC TTATGTGCTA
GCTGAGATGG AAGCGGCGGG AATGCAAGAC ACCAGTGAAG GCCTTGAGCG TTTCGATGAC
TTGTTACTGG GACATATTGG CTATGCGACT CGTAATGCCT TTAGCGCGTT AGGTAATGCC
TTGACTGGCA GCCGTTTTGC TCAATCACCA GTGAGTGGTG AAACCAAGCA GTATTATAAA
GACATGACGC GTTTATCTGC TGGCTTAGCC TTGATGACAG ATGTTTCTAT GCTTATTCTT
GGCGGCGATC TGAAACGTAA AGAGATGCTA AGTGCACGTA TGGGCGATGT GTTAAGTCAG
CTATATCTTG GTTCTGCGAC CTTAAAACTT TTTGAAGATA ATGGTCGTCA GTTTGATGAC
TTACCAGCGG TACGCCACGT TATGGCTACC CGTCTTCACT TAGCGGCAAA AGCGTTAGAT
GAAGCGATTC GTAACTTCCC AAATCGCGGG GTTGCATTGC TGCTGCGTGC ATTAATCTTC
CCGCTTGGTA ACCGATTTAA AGATGCGAGT GATAAGCTAT CGATTGATTT GGCCAATGCG
ATGAATAAGC AAGGTCCAGC TCGTGACAGG TTAACTTTCT TGTGCCCAAG TTTTGATGGG
GATACAAGTG GTATTACCGA AGTTGAAAAT GCCTTTATTG CTAAACATGG GTGCAAAGGG
CTGTATAAGA AGCTTAAGCA AGCACAGAAA GAGGGCAGCT TACCGAAGAA GTTGCCAGCA
GTGGCATTGT TTGGCGCTGC ATTGGAGATC TCGTTAATCT CAGAGCAAGA GCACCAAAAC
TTGATTAAAG CTGATGAGCT GCGCTTAGCT GCTATCGCTG TTGACGAGTT CGATAAACTT
TAA
 
Protein sequence
MATTLLVLLL IAIVVVFSVK NIRMQLITRP VFSFFKKVLP PLSVTEKEAM EAGDVWWEGE 
LFKGKPNWQL LHSYGKPTLT SEEQDFIDNQ VMTALTMIDD YDIVNNRKDL PPELWQYFKK
EGFFALIIPK KYGGKAFSAY ANSTIVSKIA SRSVSAAVTV MVPNSLGPGE LLTHYGTSEQ
KDYWLPQLAD GSAIPCFALT GPDAGSDAGA IPDTGIVCRQ EFNGEEVLGL KLNWDKRYIT
LAPVADVLGL AFQMSDPDGL LGDTKHIGIT CALIPTDHEG VEIGSRHNPL NMAFMNGTTR
GKDVFIPLDW IIGGPQYAGR GWRMLVECLS AGRGISLPAL STASGHMATK TTTAYSAVRQ
QFGLDIGQFE GVQEALARVI ANTYQLEAAR RLTTTGIDLK VKPSVVTAIA KYHMTELGRK
VIDDAMDIQS GKGIQLGPKN YLGHGYMALP ISITVEGANI LTRSLMIFGQ GATRCHPYVL
AEMEAAGMQD TSEGLERFDD LLLGHIGYAT RNAFSALGNA LTGSRFAQSP VSGETKQYYK
DMTRLSAGLA LMTDVSMLIL GGDLKRKEML SARMGDVLSQ LYLGSATLKL FEDNGRQFDD
LPAVRHVMAT RLHLAAKALD EAIRNFPNRG VALLLRALIF PLGNRFKDAS DKLSIDLANA
MNKQGPARDR LTFLCPSFDG DTSGITEVEN AFIAKHGCKG LYKKLKQAQK EGSLPKKLPA
VALFGAALEI SLISEQEHQN LIKADELRLA AIAVDEFDKL