| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2332 |
|---|
| Symbol | |
|---|
| ID | 5662725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2840688 |
|---|
| End bp | 2841335 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641236942 |
|---|
| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
|---|
| Protein accession | YP_001502187 |
|---|
| Protein GI | 157962153 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGA ATAACTGGTT AATACAGCCA CAAGATATTT TTAAACGCAG CCCTATTGTT
CCTGTAATGG TGATCAATAA GATTGAACAT GCAGTGCCGC TTGCTAAAGC ACTCGTTGCT
GGCGGGATCT CGGTTTTAGA GGTAACACTA CGTACCGATT GTGCATTAGA AGCGATCACT
AAGATTGCTA AAGAAGTACC TGAAGCCCTA GTAGGCGCGG GTACTATTCT AAATAAAGCA
CAGTTAGCAC AGGCAATTGA CGCTGGCGCT CAGTTTGTTA TCACTCCAGG TGCAACAACT
GAATTGTTAG AAGCTGCTAT GGCGGGTAAC ACACCGCTAA TTCCTGGAGT TGCTAGCATT
TCAGAAGTGA TGAAAGGCAT GGCACTGGGT TACACAAACT TCAAGTTTTT CCCTGCTGAA
GCTTCTGGTG GCGTAAATGC ACTTAAAGCT TTCTCTGGCC CACTGGCAAA TATTCGTTTC
TGCCCAACTG GCGGCATTAC CCCAAGTAGC TATAAAGATT ACTTAGCACT TAAGAATGTC
GATTGTATTG GTGGTAGCTG GATTGCGCCA ACAGATGCGA TGGAGCAGGG TGACTGGGAA
CGCATTACTG CTTTGTGTAA AGAAGCGATT GGTGCTCTAA AAGTCTAA
|
|---|
| Protein sequence | MLENNWLIQP QDIFKRSPIV PVMVINKIEH AVPLAKALVA GGISVLEVTL RTDCALEAIT
KIAKEVPEAL VGAGTILNKA QLAQAIDAGA QFVITPGATT ELLEAAMAGN TPLIPGVASI
SEVMKGMALG YTNFKFFPAE ASGGVNALKA FSGPLANIRF CPTGGITPSS YKDYLALKNV
DCIGGSWIAP TDAMEQGDWE RITALCKEAI GALKV
|
|---|
| |