| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2299 |
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| Symbol | |
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| ID | 5662692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2791252 |
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| End bp | 2791917 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236909 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001502154 |
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| Protein GI | 157962120 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAAA AAATTACAAT TATACTCGTC GATGACCATA TATTAGTCCG AGCAGGGATC
CGAAGTTTAT TAGAGTCCAT CGCCAATGTT GAAGTCATTC AAGAGTCAGG AGATGGAATT
GAAGCCTTGT CGTTACTGCG AGCCCACGAA CCGACACTGT TGATATTAGA CATCTCCTTA
CCCGGCTTGA ACGGACTCGA AGTCGCCCGT AGCGTCACAA AGATGAAGAC CAAGACAAAA
ATCTTAATGC TGTCGATGCA CAGCGACATT GAATACGTTG CAAAAGCACT CACCATAGGC
AGCCACGGTT ACCTCATGAA AGAGTCTGCC GTCGACGAAC TCGAAACCGC TATTTCTACA
CTGATGAGTG ACAAACAATA TATAGGGAAA AACATCGATC TGCAGATGGT CGATAAACTC
AAAGGCGATA GCAATCAAGA CAGCGATTTA ATAGAACTGC TGACTAGCCG TCAGAGGCAG
ATCTTGCAGC TGATTGCCGA AGGTTATTCA ACAAGGGAGA TAGCCCTACG CATGAATGTA
AGTATTAAAA CGGTTGAGAC CCATCGCGCC CATATTATGT CCCGCCTCAA TATATTTGAT
ATTGCCGGTC TCGTGCGGTT TGCCATTCGT TCTAAACTGA TTTGCCTCAA TGAAGAGCCA
CACTAA
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| Protein sequence | MSEKITIILV DDHILVRAGI RSLLESIANV EVIQESGDGI EALSLLRAHE PTLLILDISL
PGLNGLEVAR SVTKMKTKTK ILMLSMHSDI EYVAKALTIG SHGYLMKESA VDELETAIST
LMSDKQYIGK NIDLQMVDKL KGDSNQDSDL IELLTSRQRQ ILQLIAEGYS TREIALRMNV
SIKTVETHRA HIMSRLNIFD IAGLVRFAIR SKLICLNEEP H
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