| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2263 |
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| Symbol | |
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| ID | 5662656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2740859 |
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| End bp | 2742787 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236867 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001502118 |
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| Protein GI | 157962084 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR00418] threonyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000163048 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTAA TTACACTTCC TGACGGAAGC AAACGCGAGT TTGCTCACTC TGTTTCTACT
TTAGATGTTG CTGCTGACAT TGGTCCTGGT CTTGCTAAAG CGTGTATCGC TGGTCGCGTG
AACGGTGAAC TAAAAGACGC ATGTGACCTG ATTGAAACCG ATTCAGATCT TTCAATCATT
ACCGCTAAAG ATGAAGAGGG TGTTGAAATT CTTCGTCACT CTTGTGCTCA CTTGCTAGGT
CACGCGATTA AGCAACTGTT CCCTGAAACC AAAATGGCTA TCGGTCCGGT TATCGATAAT
GGTTTCTACT ATGACATCGA CTTAGATCAT AAGTTGACTC AGGAAGACAT CGATGCGCTA
GAAAAGCGCA TGGCTGAACT TGCTAAAACT AATTACGCTG TTGATAAGCG TGTAGTTAGC
TGGCAAGAAG CGCGTGATAC GTTTGAATCA CGTGGTGAAG TTTATAAAAT GGCTATTTTG
GATGAGAATA TTCCAAAAGA CTCAACGCCT GCTCTTTATC ACCATGAAGA ATACATCGAC
ATGTGTCGTG GTCCTCACGT GCCTAACATG AAATTCTGCC AAAACTTCAA ATTGATGAGC
GTTGCTGGTG CATACTGGCG TGGTAACTCA GACAATAAGA TGTTGCAGCG TGTATATGGT
ACGGCTTGGG CAGACAAGAA AGCGCTTAAA GTCCACCTTA ACCGTCTTGA AGAAGCGGCT
AAGCGTGACC ACCGTAAAAT TGGTAAGCAG TTAGATCTGT ACCATATGCA AGAAGAAGCA
CCGGGTATGG TGTTCTGGCA TAATGACGGT TGGAGTCTAT TCCTAGAACT TGAGAAGTTT
ATTCGTCAAA AGCTAGGTCA ATACACCTAT CAAGAGGTGA AGGGGCCATT AATGATGGAT
CGCGTGTTGT GGGAACGTAG TGGTCACTGG GACAAGTACT CAGAAGCTAT GTTCACAACC
AGTTCTGAAA ACCGTGAATA CGCAGTTAAG CCTATGAACT GTCCAGGTCA CGTGCAGATC
TTTAACCAAG GTCTTAAATC ATACCGTGAT TTGCCATTAC GTATGGCAGA GTTTGGTTGT
TGTCACCGTA ATGAGCCATC GGGTTCACTA CATGGCTTAA TGCGCGTACG TGGTTTCACT
CAAGATGATG CACATATCTT CTGTACCGAA GAGCAAGTGC AGCAGGAAGT GAGCGCGTGT
ATCAAGATGG TTTACGATAC ATACGAAACA TTCGGCTTTA ACAGCATCGT GGTTAAGCTG
TCGACACGCC CAGAAAAACG CATCGGTGAT GATGAGATGT GGGATCGAGC TGAAGAGGCG
CTTAAGCAAG CTCTTAAAGC AAATGACATC GAATTTGAAA TTTTACCGGG CGAAGGCGCG
TTTTACGGTC CGAAGATTGA ATTTACTTTG CACGACTGTC TAGACAGGGC GTGGCAATGT
GGTACAGTGC AGCTCGATTA CGCGTTACCT GGTCGTTTAG GTGCAACTTA TGTTGCTGAA
GATAACAGTC GTCAAACACC TGTTATGATC CACCGTGCGA TTCTAGGTTC GTTAGAGCGT
TTCTTGGGTA TTCTAATTGA AGAATACGCA GGTAAATTCC CAGCTTGGTT GTCACCAGTT
CAAGTCGTTG TAATGAATAT TACCGATAAA CAGTCCGATT ATGTGGACGA AGTCGTTAAT
TTATTCAAAG AACATGGAAT TCGTGCAACT AAAGACTTGA GGAATGAGAA GATAGGCTTT
AAAATACGCG AACATACCTT AAGGCGTGTG CCTTATCTAT TGGTCGTTGG TGACCAAGAG
ATGGAAAATA AGGAAGTAGC GGTGCGTACC CGTGAAGGCG TTGACTTAGG TAAAATGCAA
ATCGAAGAAT TTGCTACTAA GCTCAAGAAC CAGATTTCGC TCCGTAGTCT CAATTTGTTG
GAGGATTAG
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| Protein sequence | MPVITLPDGS KREFAHSVST LDVAADIGPG LAKACIAGRV NGELKDACDL IETDSDLSII
TAKDEEGVEI LRHSCAHLLG HAIKQLFPET KMAIGPVIDN GFYYDIDLDH KLTQEDIDAL
EKRMAELAKT NYAVDKRVVS WQEARDTFES RGEVYKMAIL DENIPKDSTP ALYHHEEYID
MCRGPHVPNM KFCQNFKLMS VAGAYWRGNS DNKMLQRVYG TAWADKKALK VHLNRLEEAA
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WSLFLELEKF IRQKLGQYTY QEVKGPLMMD
RVLWERSGHW DKYSEAMFTT SSENREYAVK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE EQVQQEVSAC IKMVYDTYET FGFNSIVVKL
STRPEKRIGD DEMWDRAEEA LKQALKANDI EFEILPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDYALP GRLGATYVAE DNSRQTPVMI HRAILGSLER FLGILIEEYA GKFPAWLSPV
QVVVMNITDK QSDYVDEVVN LFKEHGIRAT KDLRNEKIGF KIREHTLRRV PYLLVVGDQE
MENKEVAVRT REGVDLGKMQ IEEFATKLKN QISLRSLNLL ED
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