Gene Spea_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2263 
Symbol 
ID5662656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2740859 
End bp2742787 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content44% 
IMG OID641236867 
Productthreonyl-tRNA synthetase 
Protein accessionYP_001502118 
Protein GI157962084 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR00418] threonyl-tRNA synthetase
[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.63048e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTAA TTACACTTCC TGACGGAAGC AAACGCGAGT TTGCTCACTC TGTTTCTACT 
TTAGATGTTG CTGCTGACAT TGGTCCTGGT CTTGCTAAAG CGTGTATCGC TGGTCGCGTG
AACGGTGAAC TAAAAGACGC ATGTGACCTG ATTGAAACCG ATTCAGATCT TTCAATCATT
ACCGCTAAAG ATGAAGAGGG TGTTGAAATT CTTCGTCACT CTTGTGCTCA CTTGCTAGGT
CACGCGATTA AGCAACTGTT CCCTGAAACC AAAATGGCTA TCGGTCCGGT TATCGATAAT
GGTTTCTACT ATGACATCGA CTTAGATCAT AAGTTGACTC AGGAAGACAT CGATGCGCTA
GAAAAGCGCA TGGCTGAACT TGCTAAAACT AATTACGCTG TTGATAAGCG TGTAGTTAGC
TGGCAAGAAG CGCGTGATAC GTTTGAATCA CGTGGTGAAG TTTATAAAAT GGCTATTTTG
GATGAGAATA TTCCAAAAGA CTCAACGCCT GCTCTTTATC ACCATGAAGA ATACATCGAC
ATGTGTCGTG GTCCTCACGT GCCTAACATG AAATTCTGCC AAAACTTCAA ATTGATGAGC
GTTGCTGGTG CATACTGGCG TGGTAACTCA GACAATAAGA TGTTGCAGCG TGTATATGGT
ACGGCTTGGG CAGACAAGAA AGCGCTTAAA GTCCACCTTA ACCGTCTTGA AGAAGCGGCT
AAGCGTGACC ACCGTAAAAT TGGTAAGCAG TTAGATCTGT ACCATATGCA AGAAGAAGCA
CCGGGTATGG TGTTCTGGCA TAATGACGGT TGGAGTCTAT TCCTAGAACT TGAGAAGTTT
ATTCGTCAAA AGCTAGGTCA ATACACCTAT CAAGAGGTGA AGGGGCCATT AATGATGGAT
CGCGTGTTGT GGGAACGTAG TGGTCACTGG GACAAGTACT CAGAAGCTAT GTTCACAACC
AGTTCTGAAA ACCGTGAATA CGCAGTTAAG CCTATGAACT GTCCAGGTCA CGTGCAGATC
TTTAACCAAG GTCTTAAATC ATACCGTGAT TTGCCATTAC GTATGGCAGA GTTTGGTTGT
TGTCACCGTA ATGAGCCATC GGGTTCACTA CATGGCTTAA TGCGCGTACG TGGTTTCACT
CAAGATGATG CACATATCTT CTGTACCGAA GAGCAAGTGC AGCAGGAAGT GAGCGCGTGT
ATCAAGATGG TTTACGATAC ATACGAAACA TTCGGCTTTA ACAGCATCGT GGTTAAGCTG
TCGACACGCC CAGAAAAACG CATCGGTGAT GATGAGATGT GGGATCGAGC TGAAGAGGCG
CTTAAGCAAG CTCTTAAAGC AAATGACATC GAATTTGAAA TTTTACCGGG CGAAGGCGCG
TTTTACGGTC CGAAGATTGA ATTTACTTTG CACGACTGTC TAGACAGGGC GTGGCAATGT
GGTACAGTGC AGCTCGATTA CGCGTTACCT GGTCGTTTAG GTGCAACTTA TGTTGCTGAA
GATAACAGTC GTCAAACACC TGTTATGATC CACCGTGCGA TTCTAGGTTC GTTAGAGCGT
TTCTTGGGTA TTCTAATTGA AGAATACGCA GGTAAATTCC CAGCTTGGTT GTCACCAGTT
CAAGTCGTTG TAATGAATAT TACCGATAAA CAGTCCGATT ATGTGGACGA AGTCGTTAAT
TTATTCAAAG AACATGGAAT TCGTGCAACT AAAGACTTGA GGAATGAGAA GATAGGCTTT
AAAATACGCG AACATACCTT AAGGCGTGTG CCTTATCTAT TGGTCGTTGG TGACCAAGAG
ATGGAAAATA AGGAAGTAGC GGTGCGTACC CGTGAAGGCG TTGACTTAGG TAAAATGCAA
ATCGAAGAAT TTGCTACTAA GCTCAAGAAC CAGATTTCGC TCCGTAGTCT CAATTTGTTG
GAGGATTAG
 
Protein sequence
MPVITLPDGS KREFAHSVST LDVAADIGPG LAKACIAGRV NGELKDACDL IETDSDLSII 
TAKDEEGVEI LRHSCAHLLG HAIKQLFPET KMAIGPVIDN GFYYDIDLDH KLTQEDIDAL
EKRMAELAKT NYAVDKRVVS WQEARDTFES RGEVYKMAIL DENIPKDSTP ALYHHEEYID
MCRGPHVPNM KFCQNFKLMS VAGAYWRGNS DNKMLQRVYG TAWADKKALK VHLNRLEEAA
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WSLFLELEKF IRQKLGQYTY QEVKGPLMMD
RVLWERSGHW DKYSEAMFTT SSENREYAVK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE EQVQQEVSAC IKMVYDTYET FGFNSIVVKL
STRPEKRIGD DEMWDRAEEA LKQALKANDI EFEILPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDYALP GRLGATYVAE DNSRQTPVMI HRAILGSLER FLGILIEEYA GKFPAWLSPV
QVVVMNITDK QSDYVDEVVN LFKEHGIRAT KDLRNEKIGF KIREHTLRRV PYLLVVGDQE
MENKEVAVRT REGVDLGKMQ IEEFATKLKN QISLRSLNLL ED