Gene Spea_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2260 
SymbolrplT 
ID5662653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2739653 
End bp2740012 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content41% 
IMG OID641236864 
Product50S ribosomal protein L20 
Protein accessionYP_001502115 
Protein GI157962081 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.55159e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAGAG TTAAGCGTGG TGTAACCGCT CGTGCTCGTC ACAAGAAAGT ACTTAAATTA 
GCTAAAGGTT ATTATGGCGC TCGTAGCCGT ACTTACCGTG TTGCTGTTCA AGCAGTAACT
AAAGCTGGTC AATATGCTTA CCGTGACCGT CGTCAAAAGA AACGTCAATT CCGTCAACTA
TGGATTGCAC GTATCAATGC GGCATCTCGT CAAAATGGTC TATCTTATAG CCGTTTCATT
AATGGTTTGA AAAAAGCATC AATCGAAATC GACCGTAAGA TCCTGGCTGA CATCGCTGTT
TTCGATAAAG TTGTATTTGC AACTTTAGTT GAAAAAGCAA AAGACGCTTT AGCTAAGTAA
 
Protein sequence
MPRVKRGVTA RARHKKVLKL AKGYYGARSR TYRVAVQAVT KAGQYAYRDR RQKKRQFRQL 
WIARINAASR QNGLSYSRFI NGLKKASIEI DRKILADIAV FDKVVFATLV EKAKDALAK