| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2238 |
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| Symbol | |
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| ID | 5662631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2712235 |
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| End bp | 2714160 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236841 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001502093 |
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| Protein GI | 157962059 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000407323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACG CCCATGCGTT GCTAAGCCAA TATTTTGGTT TTCAGCAGTT TCGTGAAGGA
CAGGAAGAAG TTGTCCAAAA TATTCTAAAT GGTCAAAGCG CTGCGGCTAT TTTCCCTACG
GGTTCAGGTA AATCTCTTTG CTATCAATTG CCGGCCTTAG CCCTACCACA CTTAACTCTT
GTGGTATCAC CACTACTCGC CTTGATGGAC GATCAGTTAC AGTTTTTAAA TAAAAAGGGC
ATTTCAGCCG CGTCTATCGA CTCGACTCAG ACCAATGAGC AGGCGAGTGC GGTTATTGAG
GGGGTAACCT CTGGGCGGAT TAAGATTTTA ATGATCTCAG TAGAGCGCCT TAATAACGAA
CGTTTTAGGC GGTTTATCTC AACAGTACCT ATCTCTATGC TAGTCATCGA TGAGGCGCAC
TGTATCTCAG AGTGGGGACA TAACTTTAGA CCTGATTATC TCAAACTACC TGCTTATCAG
AGACAACTGC AGATCCCACA AGTATTGCTT CTAACGGCGA CAGCGACCCC TAAAGTTATA
GAGGATATGG GGAAAAAGTT CGGTATAGCT GAGCAATGCG TCACTTTAAC GGGTTTTTAT
CGTCCGAATC TAAATCTTCA AACTGTAGGG ATCTCATCAC CAGATAAGCT AAATTACCTC
TGCGATTGGC TCGAGGTGAG AAAAGAGCAT AGTGGTATTG TTTATGTGAC CTTACAGCAG
ACGGCTGAGT TTGTTGCAAA TGCTTTGATT AAGAAGGGGT TCTCAGCACT TGCTTATCAT
GCAGGCATGG ACAGCGATAA GCGTAAATCG ATTCAAGCAC AGTTTATGTC AGGTGAGGTG
CCTATTATCG TCGCCACTAT CGCTTTTGGA ATGGGAATTG ATAAGAGTGA TATTCGCTTT
GTCGCCCATT ATGATCTTCC TAAGTCCATA GAAAACTATG CTCAAGAGAT AGGGCGTGCG
GGGCGTGATG GTTTTAGTTC CGACTGTCTG GTACTAGCCA ATAGAGATAA CCTTAATGTC
TTAGAAAACT TCGTATATGG TGACACTCCA GAACTGAGTG CGATAGAGCA TGTTATCGAT
GAAATAAAGC GTGAAGCGCA AACCAGTTCA GTGTGGGAGT TGATGCTTAA CCCATTGTCT
AGCGCATCGA ATATTCGAAT TTTGAGCTTA AAGACGTTAC TGGTGTACTT AGAAATGTTA
CGGGTCATCA AGCCAAAATA CAGTTATTTT GCCGAATATC GTTTTAAGCT CTTGTGTCCG
GTTGAGCAGA TGTTGGAAAA GTTCGATCCT GATAGGCAAG TCTTTATCAA TGCCGTGCTC
GATAGTTCAC AGAAGGCAAA GCTTTGGTAT AGCGCTAACT TTGAGGCATT AGAGCAGAAA
GTGCCTCATA GCCGAGATAG AGCGATCAAA GCCTTAGATT ACTTGCATCA AAAACAGCTT
ATCGAATTGC AAAGCAAGCA GTTAACTCAA GTTTATGAAA TATTTAGCAC CAATATTGAT
GACTCTTTAG CTTCGAGACT GTTTAATCGT TTTAGTATCA AAGAGCAGAG CGAAATTACC
CGTATTAATC AGCTGGTGGA TTTTTTTGAT AGTGAGTCCT GCTTAAGTTT ACAACTGGCT
CAATACTTTG CCGATCCTCG CTTAAGCGGA CCTTGTGGTC ACTGTAGCGT ATGTAGTGGG
CAAACGGCTA AATTGCCGGT AGCCGCGGGG CTAAAACCTT TGAGTCAGTT TGACTTCAAT
GGGTGCTGCC TCGAAGCGAT AAAAAAACTA GGTGTACACG CAAGCCCGGT TTTAGTTACG
CGATTTCTTT GTGGATTGAC CACCCCGATG TTTACCAAGT TGAAAATGAG ACAGCTTAAC
GGTTTCGGGC AATTTGAGCA TTATCGCTTC GCCGATATCT TATCGTGGAC CCAAAGCCAC
TTATGA
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| Protein sequence | MDNAHALLSQ YFGFQQFREG QEEVVQNILN GQSAAAIFPT GSGKSLCYQL PALALPHLTL
VVSPLLALMD DQLQFLNKKG ISAASIDSTQ TNEQASAVIE GVTSGRIKIL MISVERLNNE
RFRRFISTVP ISMLVIDEAH CISEWGHNFR PDYLKLPAYQ RQLQIPQVLL LTATATPKVI
EDMGKKFGIA EQCVTLTGFY RPNLNLQTVG ISSPDKLNYL CDWLEVRKEH SGIVYVTLQQ
TAEFVANALI KKGFSALAYH AGMDSDKRKS IQAQFMSGEV PIIVATIAFG MGIDKSDIRF
VAHYDLPKSI ENYAQEIGRA GRDGFSSDCL VLANRDNLNV LENFVYGDTP ELSAIEHVID
EIKREAQTSS VWELMLNPLS SASNIRILSL KTLLVYLEML RVIKPKYSYF AEYRFKLLCP
VEQMLEKFDP DRQVFINAVL DSSQKAKLWY SANFEALEQK VPHSRDRAIK ALDYLHQKQL
IELQSKQLTQ VYEIFSTNID DSLASRLFNR FSIKEQSEIT RINQLVDFFD SESCLSLQLA
QYFADPRLSG PCGHCSVCSG QTAKLPVAAG LKPLSQFDFN GCCLEAIKKL GVHASPVLVT
RFLCGLTTPM FTKLKMRQLN GFGQFEHYRF ADILSWTQSH L
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