Gene Spea_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2234 
Symbol 
ID5662627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2707600 
End bp2708103 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content37% 
IMG OID641236837 
Productleucine-responsive transcriptional regulator 
Protein accessionYP_001502089 
Protein GI157962055 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000872232 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAATA ATAAAAAGAG TCCTATAAAA GACTTAGATC GTATTGATAG AAATATACTT 
AATGAATTAC AGATTGATGG CCGAATTTCA AATGTCGAGT TATCTAAGCG TGTAGGTTTA 
AGCCCAACAC CTTGCCTTGA AAGAGTTAAA AGACTTGAAA AGCAAGGTTA TATAAAGGGT 
TACACGGCAT TAGTAAACCC TCATTACTTG GGTGCTTCAT TATTAGTCTT TGTAGAAATC 
ACCTTAAACC GTGACACTGC TGAGGTGTTT GATAAGTTCA ATAAAGCCGT ACAACTGCTC 
GATGACATCC AAGAATGTCA TTTAGTCTCT GGTGATTTTG ACTATTTATT AAAGACGCGA 
GTTTCAGATA TGTCTGCATA TCGTCGTTTA CTCGGTGAAA CACTGCTGAA GTTGCCAGCA 
GTTTCAGATA CTCGTACTTA TGTCGTGATG GAAGAAGTTA AGCAAACCAA TCGTGTTGCT 
ATCAATACCG TTTCAGATGC TTAA
 
Protein sequence
MVNNKKSPIK DLDRIDRNIL NELQIDGRIS NVELSKRVGL SPTPCLERVK RLEKQGYIKG 
YTALVNPHYL GASLLVFVEI TLNRDTAEVF DKFNKAVQLL DDIQECHLVS GDFDYLLKTR 
VSDMSAYRRL LGETLLKLPA VSDTRTYVVM EEVKQTNRVA INTVSDA