| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2190 |
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| Symbol | |
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| ID | 5662583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2654786 |
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| End bp | 2656330 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236793 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001502045 |
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| Protein GI | 157962011 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC TCTCTCAAGC ATCGTCAAGC CCTGGTGATG CTCAAGTATT AAGTGAAGGC
AGTCGTAAAC TGGTGACCTT GGCGGTGATG TTATCCGCTA TCATGGTCTT ACTCGACATG
ACGATTGCGA ATGTTGCCCT ACCGCATATG ATGGGCGCAT TGGGGGTGAC GTCCGATCAA
GTCACTTGGG TACTGACCTC CTACTCTATG GCTGAGGCGA TATTTATCCC GCTAGCCAGT
TTTCTTGCGC TTAAATTTGG TATTCGTAAT CTACTATTGA TCTCAGTCAG TGGATTTATT
GTCAGCTCGG CTCTTTGTGG CCAAGCCGAT ACCATTACTG AAATGGTGAC CTTTAGGGTG
ATGCAAGGAG CATTTGGCGC TTCGGTGATC CCTCTATCTC AGTCAATCAT GGTGCAGATC
TATCCCGCTA ATCAGCGCGG TAAGGCGATG GCACTATTTA GTGTTGGCGT ATTGCTTGGG
CCAATTCTAG GGCCGACACT AGGTGGGATC ATTACCGAAA ACATGGATTG GCGCTGGATT
TTTTACGTTA ATCTACCCGT TGGCGCCATC TGCCTTACGC TGATTTACAC CTTTGTTAAG
CTCAGTGGTA AAGGTAAACC TAAAATTGAC TGGCCAATCG TTATCGCAAT GACAATCGGT
ATTGGTCTGC TGCAGATGGT GCTCGACCGG GGTAATCAAG AATCTTGGTT CGAGTCCAAT
ACCATCTTGT TTTCAACCAT AATCAGCGCC ATTGCGATTA TTTTCTTTGT GGCACGCTCT
TTTACGACTA AGAGTGAGAT CGCTCCTGTT TGGTTATTGC GAGACCGTAA CCTTGCAATG
TCATGTCTGG TTATGGCTGG CTTCTCGATG GGAATGTTCG GTATCACTCA GTTGCAACCT
ATGATGCTAG AGCAGTTATT AAATTACCCG GTAGAAACCA CAGGCTTTGC CATGGCGCCA
AGAGGTCTCG CATCAGCATT TGTGCTACTG ATGATGGCGC GCTATATGGA TAGAATTGAT
GCCAGGTTGT TGATTGTTAT TGGCCTGAGT CTTAATGCGC TCGGAACCTA TTTGATGACG
CAATACTCCC TTGAGATAAA CATCTATTGG ATTTTATTAC CCAGTATCAT TCAAGGCGCA
GGCATGGGCT TAGTGTTTGC GCCTCTTAGC CAGTTGGCCT ACGCCACCCT TGCCCCCAAA
GACACAATCG GTGGTGCCGT GGTGTTTAAC TTATGCCGCA CCATTGGCGG CTCTTTCGGG
ATCTCTATTG TGAATACTTA TTTCTTCCGT ACCCAGCAGC GGGAATGGAA CGAATTAGGC
GGTGCACTTT CGCCAACCAA TCCAGTTTTA CAGCAAGCGG CACAAGCCCA AGGAACCACT
ATCACCGACC CGACATTTTT GGCTCAGATG CAAAATATCT TACATCAACA ATCAACCTTG
ACGGCGTTCG TATTTACATT CGGTTTTCTG TTGGTCTCCT ACCTGTGTCT CATCCCGCTA
TTGGCCCTGT TTAAACCCAA ACCTAAAGTT GTGCCCGAGT CGTAA
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| Protein sequence | MTELSQASSS PGDAQVLSEG SRKLVTLAVM LSAIMVLLDM TIANVALPHM MGALGVTSDQ
VTWVLTSYSM AEAIFIPLAS FLALKFGIRN LLLISVSGFI VSSALCGQAD TITEMVTFRV
MQGAFGASVI PLSQSIMVQI YPANQRGKAM ALFSVGVLLG PILGPTLGGI ITENMDWRWI
FYVNLPVGAI CLTLIYTFVK LSGKGKPKID WPIVIAMTIG IGLLQMVLDR GNQESWFESN
TILFSTIISA IAIIFFVARS FTTKSEIAPV WLLRDRNLAM SCLVMAGFSM GMFGITQLQP
MMLEQLLNYP VETTGFAMAP RGLASAFVLL MMARYMDRID ARLLIVIGLS LNALGTYLMT
QYSLEINIYW ILLPSIIQGA GMGLVFAPLS QLAYATLAPK DTIGGAVVFN LCRTIGGSFG
ISIVNTYFFR TQQREWNELG GALSPTNPVL QQAAQAQGTT ITDPTFLAQM QNILHQQSTL
TAFVFTFGFL LVSYLCLIPL LALFKPKPKV VPES
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