| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2181 |
|---|
| Symbol | |
|---|
| ID | 5662574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2640913 |
|---|
| End bp | 2643300 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641236784 |
|---|
| Product | putative ATP-dependent protease La-relatedprotein |
|---|
| Protein accession | YP_001502036 |
|---|
| Protein GI | 157962002 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAA AACCTCTCAG CAGTGCCAAG CTTTACCGCG CGTCGACGCT AAAAAAGCTC
TCTTCAGACT GCAAGTCGAC TAAACACCTC GAACCCTTAG ACGAAATCGT TGGTCAGGCC
CGCGCGCAAC AAGCGGTAGA ATTTGCCCTT TCTATGAAAG AGAAAGGCTA TAACATTTAC
GCGCTTGGCC GTAACGGCTT AGGCAAGCGT ACTATGGTTT TACGCCACCT TAATCGTCAA
GCGCCTAATT CGAACGGCCG TACACTATTC GATTGGTGCT ATGTAGTTAA CTTCGATGAT
TCCCGCAGCC CCAAGGTACT AAAACTTCCC GCAGGCATGG GGCTTAGCTT TAAAAAAGAC
ATAGAAAAAC TGATGTCGAA ACTGCTTAAG GCATTGCCTT TAGCGTTCGA TAATGAGATG
TACTACAACC GAGCCGACAG ATTAAAAAGC CAACTGACTT CGAGACAGGA AGAAGCATTA
CTGGTGCTAA CCGAAGAAGC TAAGCGTAAT AGTGTTGGCC TATCTATCTC TGCCCAAGGT
AATTACGAGC TTGTTGCATT AAATGGTGAG GAACCTCATA CAGAAGAAAG CTATGTGGCA
CTCTCTGCGC AAGAGCAAGA AAGGATGCAG AATGCAATTT CAGCTCTTGA GGCTCAGCTT
CGTGGCATCG TTAGGCAGAT CACCGTGTGG GAGGAAGAGT ACTCTGAAAA GCAGCAAAAA
CACGATGAAC AAGTCGCTGA AGAAGTCCTT ACCCATGCAC TAGCCAGTCT TAAACAGCAA
TATAAAGAAC AGACTAATGT AAAATCCTAC ATAAAGGCGA TGCATAAAGA CATCCTCGAC
AATCTGGACA TTTTCTTGGA GGAAAGCGAA GAGCAAGCCG CCCTCGCCTA TGCTTCAATG
AGTAAGAAGA TGCCAAGGCG TTACCAGATC AATGTGTTGG TGTCACAGGA GTCTCAATTA
CAACCTATCA TCGTTGAGGA GACTCCGAAC TATCACACCA TCTTCGGCTA TGTCGAAAAT
GCCACCTATA AAGGCACGGT TTTTACCGAT TTCTCTCTCA TTCGCCCAGG TAGTCTACAT
AAGGCAAATG GCGGCGTACT GATGATAGAT GCGGTTAAAG TACTTGAGCA TCCGTATGTA
TGGGACGGCT TAAAGCGGGC TCTGAGATCA CGCAAGCTGA GTTTAACTTC TCTCGAGCGT
GAAGTGACCT TGTCTGGCAC CATCTCATTG GATCCTGAGG CGATTCCATT AGACGTGAAA
ATCATTTTAT TCGGTGATTT TGCTACCTAC AAGCTATTGC AGCAGTATGA CGCCGAGTTT
ACCGAGTTGT TTCGCGTAAC TGCCGACTTT GAAGATAGAA TGCCGCGTAC CGATGTGTCT
GAGGGGCATT ATGCCCAGTT CATCTCCAGT ATTGTACACA GCAACCAGAT CTTACACTGC
GATAGAAAAG CAATCGCTCG AGTCATCGAG TTTAGCTCGC GTCAAGCCGA TGATCAGAAT
ATGCTTTCAC TGCATTCAGT CGATATCGCC AATCTATTAC GTGAGGCAAA CTATTGCGCC
CGTGCAGCGA ATGCCAACAT GATCCGCGTT AGCCATGTGG AACAGGCTCT ATTTAATAAA
GAAAAACGCA TCTGCCGCGC AAAAGATGAA TTTATGCAAA GCTTTATCAA TGGCCAAACC
TTAATCGATA CTCAAGGCGA AACGGTTGGT CAAGTGAACG GTCTATCTGT GATGTCGACA
ACCGATTACC AATTTGGTGC TCCTAGCCGA ATTACCGCCA CCAGCTCATT TGGTGAAGGT
AAGGTATTCG ATATCGAGCG CAATGTTGAA CTCAGTGGCA GTATCCACTC AAAAGGCGTA
ATGATTTTAA CCGCTTATAT TGCAGCTATC TTAGGTAAGA CTGATAAGAT CCCACTATCG
ACTCACCTCA CCTTTGAACA ATCCTATGGT GGAGTCGATG GTGACAGTGC AACAATGGCA
GAGTTATGCG CCATGTTGTC ATCTTTTTCG GGTAAAGGGA TCCGTCAAGA TATCGCGATT
ACCGGCTCGA TGAACCAGTT TGGTGAAGCG CAGCCCATTG GGGGCGTCAA TGAGAAAATT
GAAGGCTTCT TTGATGTGTG TAAGATTAAG GGGCGTAGAG ATACCCAAGG GGTCATTATT
CCGCAGTCGA ATGTCCACAA TTTAATGTTA CGTCGAGATA TTGTCGAAGC GGTTGAGAAA
GGCAAATTCC ATATTTGGGC CATCAACCAT GTTAACCAAG CCATTGAATT GCTCACGGGT
TGCAAAGTCG GCACCTTGAA TCAACAAGGC GACTACCCTA AAAATAGTAT TTTAGGCTTA
GCCCAAGCGA GACTTAACGG CTTACGTCAC AGAGACACCA AAGACTAG
|
|---|
| Protein sequence | MPIKPLSSAK LYRASTLKKL SSDCKSTKHL EPLDEIVGQA RAQQAVEFAL SMKEKGYNIY
ALGRNGLGKR TMVLRHLNRQ APNSNGRTLF DWCYVVNFDD SRSPKVLKLP AGMGLSFKKD
IEKLMSKLLK ALPLAFDNEM YYNRADRLKS QLTSRQEEAL LVLTEEAKRN SVGLSISAQG
NYELVALNGE EPHTEESYVA LSAQEQERMQ NAISALEAQL RGIVRQITVW EEEYSEKQQK
HDEQVAEEVL THALASLKQQ YKEQTNVKSY IKAMHKDILD NLDIFLEESE EQAALAYASM
SKKMPRRYQI NVLVSQESQL QPIIVEETPN YHTIFGYVEN ATYKGTVFTD FSLIRPGSLH
KANGGVLMID AVKVLEHPYV WDGLKRALRS RKLSLTSLER EVTLSGTISL DPEAIPLDVK
IILFGDFATY KLLQQYDAEF TELFRVTADF EDRMPRTDVS EGHYAQFISS IVHSNQILHC
DRKAIARVIE FSSRQADDQN MLSLHSVDIA NLLREANYCA RAANANMIRV SHVEQALFNK
EKRICRAKDE FMQSFINGQT LIDTQGETVG QVNGLSVMST TDYQFGAPSR ITATSSFGEG
KVFDIERNVE LSGSIHSKGV MILTAYIAAI LGKTDKIPLS THLTFEQSYG GVDGDSATMA
ELCAMLSSFS GKGIRQDIAI TGSMNQFGEA QPIGGVNEKI EGFFDVCKIK GRRDTQGVII
PQSNVHNLML RRDIVEAVEK GKFHIWAINH VNQAIELLTG CKVGTLNQQG DYPKNSILGL
AQARLNGLRH RDTKD
|
|---|
| |