| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2162 |
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| Symbol | |
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| ID | 5662555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2616463 |
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| End bp | 2617341 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641236765 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001502017 |
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| Protein GI | 157961983 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0642494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAT GTAATTCGAG AACCGTAATT ATTACCGGCA GTGGCGGTGG CCTAGGTCGA
GCTTATGCGT TAGCGTTGGC TGCAGAAGGA GCCAATGTAG TAGTTAATGA TATTCGCGCC
GACGCTGCTG CAGCCGTTGT TGACGAGATC TTGACTCAAG GTGGGCAAGC TATTGCGAAC
TCAGATGACA TTACTCGCAT GGACACCGCA ACCAACATTG TCGATGCAGC GTTAGAGGCA
TTTGGTGAGG TACATGTACT GATTAATAAT GCCGGTGTTT TGGCTGACAG AATGTTTATT
AGCCTTAGCG AAGCAGATTG GGACAAGGTC ATGCAGGTTC ACTTAAAGGG CCATTTTTGT
TTAGCCAATA TTTTGGGGCG TCGTTGGCGT GACCTTGCAA AGGCCGGTCA ACCGGTTGAC
GCACGGATCA TCAATACTAG CTCAGGTGCA GGGCTTCAAG GCTCTATTGG GCAGTCAAAC
TACTCTGCTG CTAAAGGTGG CATTGCATCG TTAACATTAG TTCAAGCAGC TGAACTGGGG
CGTTACGGGG TAACAGTAAA TGCACTCGCG CCCGCAGCCC GCACCTCAAT GACCCAAAGT
GCCATGCCTG ATGTGGTAAA GAAACCAGAA GATGGTAGTT TTGACCTGTG GGCGCCGGAA
AATGTTGCGC CGCTGGTTGT ATGGTTAAGC AGTTCTGAAT CGAAGCATAT CTCAGGACAG
ATCTTGGAAA GCCAAGGTGG ACGGATCTCC TTATGTGATG GTTGGCGTAC CGGTTTGACG
GTAGATCATG GTAAACGATG GGAAATTAGC GAGGTAGGCT ACGCTGTTGA CCAACTCATA
GGAAAAGCAC CTGCAGCACA AAAAGTATGG GGTAGCTAA
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| Protein sequence | MKACNSRTVI ITGSGGGLGR AYALALAAEG ANVVVNDIRA DAAAAVVDEI LTQGGQAIAN
SDDITRMDTA TNIVDAALEA FGEVHVLINN AGVLADRMFI SLSEADWDKV MQVHLKGHFC
LANILGRRWR DLAKAGQPVD ARIINTSSGA GLQGSIGQSN YSAAKGGIAS LTLVQAAELG
RYGVTVNALA PAARTSMTQS AMPDVVKKPE DGSFDLWAPE NVAPLVVWLS SSESKHISGQ
ILESQGGRIS LCDGWRTGLT VDHGKRWEIS EVGYAVDQLI GKAPAAQKVW GS
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