Gene Spea_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2152 
Symbol 
ID5662545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2606276 
End bp2607211 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content44% 
IMG OID641236755 
Producthypothetical protein 
Protein accessionYP_001502007 
Protein GI157961973 
COG category[R] General function prediction only
[I] Lipid transport and metabolism 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon
[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTT TTAAACCATT GCCATTGGCA ACAAAAATTT CTATGCCTTT TTGGCAAGCA 
TTAAAAGAAC AAAGTATTCA ATTACAGCAA TGTAATTCAT GCGACGGTTG GGTCTTTTTT
CCTCGTAATC ATTGTAGTCA TTGCTTAGCG CATGACTTGA CGTGGAAACC CGTTAGCGGC
GATGCAACTT TATATACTTA TACCGTTGCC CGAGTACCGA CTATGGCGGA ATTTAAAGAC
GAGTCCCCAC AAATTCTCGC CGTTGTAACG CTTAAAGAAG GGGTGAGAAT GAATACCACC
CTTGTTGGCG TGCAAGAGAA AGACATCATG GTCGGCATGC ACTTAAAGCC TGTATTTGAC
CAAGTTGATG TCAAAGGTAA TACACTTTTA AGGTTCACCA GTGTTGATAG CGATTTAAGT
GTTCTAGAGT ATCAAGACCC TCTGGCTAAC CTAGCTAGAA ATAGTCAGGG ACAAGTTCAG
GTACCAATTA CCAATTTAGC TGCACTGAAT GCGTTAGTGA CCGATGAGTT TTCTCCATGG
AGTGAGCCGT TAACGGTAGA TCAAGGCTTG ATTAATGGGT TCGCTGATCT TTCTGGCGAT
GATTATTGGA TCCATACCGA CCCAGAAAAA GCCGCTAAAG AGAGCCCGTT CGGCACGACG
ATTGCTCATG GCTCGTTAGT GCAAGTGTTA CAGTCACGGT TGCCACTGAC CTTGCCATAT
GAAATTGTGG GTTTTAATAC CATGGTTAAT TACGGTTCAG ACAGATTGAG GTTTCCGACC
CCAGTCCCAG CTGGCGCACG GATCCAATCA CGCGCTAGAG TTAAATCGGT AGCCTCTACC
CATAAGGGAC TGCAACTTAT CCTCGAAGTC CATATTCATT TAGTCGATAA CGATAGGCCT
TCAGTTATCA ATGAATTGGT CATTTTCTAC CGCTAG
 
Protein sequence
MSSFKPLPLA TKISMPFWQA LKEQSIQLQQ CNSCDGWVFF PRNHCSHCLA HDLTWKPVSG 
DATLYTYTVA RVPTMAEFKD ESPQILAVVT LKEGVRMNTT LVGVQEKDIM VGMHLKPVFD
QVDVKGNTLL RFTSVDSDLS VLEYQDPLAN LARNSQGQVQ VPITNLAALN ALVTDEFSPW
SEPLTVDQGL INGFADLSGD DYWIHTDPEK AAKESPFGTT IAHGSLVQVL QSRLPLTLPY
EIVGFNTMVN YGSDRLRFPT PVPAGARIQS RARVKSVAST HKGLQLILEV HIHLVDNDRP
SVINELVIFY R