Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2130 |
Symbol | |
ID | 5662523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2581476 |
End bp | 2582561 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236733 |
Product | ferredoxin |
Protein accession | YP_001501985 |
Protein GI | 157961951 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.896649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCAT CTCGCTATCA TCTGTTGACA GTCAGTAAAC TGGTAAATGA AACCTCAGAT GCACGTTCAG TGATTTTTGA AGTGCCGCCG AGTTTACGTC AAAAATTTGC ATTTAAAGCC GGGCAATTTC TTACATTCAG GATCCCTAAA AACGGCGAAC ATCTACTGCG TTGTTATTCG TTGGCTAGTA CACCAGACGA ACCTATGTTG AAAGTTACCG TGAAACGGGT GGCTAATGGC GTGGTATCAA CTTGGGCGGT AAACGACTTG AAGGTCGGCG ATCAAGTCGA GGTCATGCAA CCTGCAGGTA TTTTTATACC TAAATCCGTA AGTGGTGACT TATTGTTGTG TGCTGGTGGA AGTGGCATCA CCCCGATATT TTCAATTTTA CAAACTGCCT TGAAGCAAGG CTCAGGTAAT ATCCGCTTGA TCTACGCCAA TCGTGATCAA GACTCGGTCA TTTTTAAAAA TGAATTGATA ACCCTAACAG AACAATATCC AAAACGGCTC GAGGTTATCC ACCTTCTTGA CTCCGTTTCA GGGATCCCAA GTAATCATTT ACTGGCGCGA TTAGCCCAAC CCTTTGCTAG CACGCTTAAC TTTGAGGGGG CATTTATTTG CGGTCCAGCA CCTTTTATGG ACTCAATGGA GTACGCATTA GAATCAATCA ACTTGTCAGC CGACAAAATC TACGTAGAAC GTTTTATTTC ATTACCCAAT GAAAAAATAG CGGGAGGGCA AGCAACTGAC GTACCAAATA ACCGAATCGA AACCGTTACA CAACATAGTA ATGGTGCTAG CGATACGTTG ATCGATGCTG TCGCCACGAT CGAGCTCGAT GGTCAAACCC ATAATATAGA CTGGAGCAAA CAAGATACCC TGCTTGAAGC CGCTGAAAAG GCTGGCCTAT CTTTGCCCCA TTCATGTAGA GAGGGAATGT GTGCATCTTG CATGTGCGAA GTCAAAGAGG GCCAGGTTCA ACTACGCGCA AATGAGGTTC TTAGCGAACG AGATTTAAAA CAATCGCTAA CCTTAAGCTG TCAGGCAATG CCCCATTCTT CTAAAGTCCA CATTTGCTAT ACGTAA
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Protein sequence | MSSSRYHLLT VSKLVNETSD ARSVIFEVPP SLRQKFAFKA GQFLTFRIPK NGEHLLRCYS LASTPDEPML KVTVKRVANG VVSTWAVNDL KVGDQVEVMQ PAGIFIPKSV SGDLLLCAGG SGITPIFSIL QTALKQGSGN IRLIYANRDQ DSVIFKNELI TLTEQYPKRL EVIHLLDSVS GIPSNHLLAR LAQPFASTLN FEGAFICGPA PFMDSMEYAL ESINLSADKI YVERFISLPN EKIAGGQATD VPNNRIETVT QHSNGASDTL IDAVATIELD GQTHNIDWSK QDTLLEAAEK AGLSLPHSCR EGMCASCMCE VKEGQVQLRA NEVLSERDLK QSLTLSCQAM PHSSKVHICY T
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