Gene Spea_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2128 
Symbol 
ID5662521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2578799 
End bp2579803 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content44% 
IMG OID641236731 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_001501983 
Protein GI157961949 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.437316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAA TTTTTACTAT CTCTATTTCA TTGATTGTCG CCGCAGCCGG AATTATTGCT 
TTTTCGGAAA GAGAAACAGC ACCACTCGCT CACAGTAGCA TCCCCATTAC TAATATGAAC 
GTCACCAATG TTGTCGCTAC ATCTGCTGGA CTCGTCGCCA GTGGTGAGCT TGGGACGATA 
TTGTTATCTA AAGATGAGGG GAAGACATGG AATATGAGCA ATATCGATAC TCAGCGCTAT 
GCGTTGATCA CCCGGATGTT GTTTGACAGC CCTGATTTTG GGCTGGCTAT TGGCCATGAG 
GGCTGGATCT TAAAAACAAC TGACGGCGGA CTTAACTGGC GAGAAGTCGC ATTCGACCCA 
TCTGCCAGTG ACCCTTTATT CAGTATTGCC AAACTAAATA GTGGTCAATG GTTAACTGTA 
GGTGCGTTTG GCAATTCAAT GGTTTCCAAC GATAACGGTG AAAACTGGAA TAAAATTGCC 
GCTCCAGCGG CCACGGATTG GCATTTAAAT CGACTAATCT CTGACGACAA CAAACAAAAT 
TGGTTAATTG TTGGCGAGGC AGGCACGGTT CTGCGTTCAC AAAATGGCGC TGACAATTGG 
CAAGAATTAG CAGCATTTTA CGATGGGTCG CTATATGGAG GACTGCATTT AGGCGGTTCA 
AAATGGATTG TGTATGGGAT GAGAGGCAAT ATTTTTCGTA GTGAAGATAA TGGTGATAGC 
TGGCATAAAA TCAACTTCCC CTACCCCATT TCTTTGTTTA ATCACCTTTT ATTACCAAGT 
GGAGAGTTGC TCATCGCGGG CCAAGGAGGA ATTGTACTGG CGAGTGATGA TCAAGGAGAA 
ACGTTCAAAA TCATCCAAGG TGGTGGACGT TTATCAATTA CTGATCTGTT AATGCTACCT 
GATGGCCGAT TACTGTTTGC AACTGACTCT GGAGTGGTAC ATCCAGCCAC AAACAGCACA 
GGGTTAATAC CAAGCACACC TAATACTAAT AATTCAAATA GCTAG
 
Protein sequence
MHIIFTISIS LIVAAAGIIA FSERETAPLA HSSIPITNMN VTNVVATSAG LVASGELGTI 
LLSKDEGKTW NMSNIDTQRY ALITRMLFDS PDFGLAIGHE GWILKTTDGG LNWREVAFDP 
SASDPLFSIA KLNSGQWLTV GAFGNSMVSN DNGENWNKIA APAATDWHLN RLISDDNKQN 
WLIVGEAGTV LRSQNGADNW QELAAFYDGS LYGGLHLGGS KWIVYGMRGN IFRSEDNGDS 
WHKINFPYPI SLFNHLLLPS GELLIAGQGG IVLASDDQGE TFKIIQGGGR LSITDLLMLP 
DGRLLFATDS GVVHPATNST GLIPSTPNTN NSNS