| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2127 |
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| Symbol | |
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| ID | 5662520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2576334 |
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| End bp | 2578784 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236730 |
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| Product | hypothetical protein |
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| Protein accession | YP_001501982 |
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| Protein GI | 157961948 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00224294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTGT CTCAATCTAG CTCAAATAGC TCCACTGAAA TCAGCTTACT CAAACGTTTT
GTCGACTTCA GTGCCCGTCA GCTCATCCAG AAACGTAAGC CTCTTGGGCT ACTCTTTTTG
TTGATCACCC TTTTGCTTAG CTACTCTGCT TTAGATACTC GCTTTGATCC CGGCTTTACT
AAGTTAGTTC CTATTCAACA CCCTTATATG CAGGCTTTTT TAAAGCACTC AAGCACCTTT
ACCGGTAGTA ACCGAGTCAT GGTCAGTATG ACGTGGACCG GTGAGGGGGA TATTTATAAT
GCAGAATTTC TTAATCGACT CAGAAAAGTC CATGATGAAG TTATTTTTAC ACCAGGCATA
AATAGAACAA CGGTAAGATC ATTATTTGCG CCGGAAGTGC GTTACATGGA AGTCACAGAA
TTTGGATTCA TGGGTGATGT GGTTATCCCT TCTCGATTTA CAGCCGACGA AGCAGGGCTA
AACTGGGTGC GAACCAATGT AACTAAATCT GGACAAGTGG GCAATTTAGT CTCAAATGAT
CTTAAGTCCG CCATGGTTCA AGCCGATTTG ATGGAAACCG ATCCTGAAAC AGGAGAAGCC
ACAGACTATG CAAAAGTAGC TGCCCACCTT GAACAAATTC GTAGTGAATT AGCAGGACAA
GGAATTGACA TCCAAATCAT TGGTTTTGCT AAAGTTATGG GCGATGTCAT GGATGGGTTG
TCTACGGTTT TACTGTTTTT TGTTATCGCA TTCATTGTGA CCTTGCTACT GCTCTGGCGT
TACACTCTAT CGCTAAAACT CACCTTGTTG GCGATTACCG TTGCATTACT GCCTGTCGTT
TGGCTACTTG GGATCCTACC ACTGCTTGGC TACGGCATCG ATCCTATGTC TGTACTCGTC
CCTTTCTTAA TTTTTTCTAT CGGTGTGTCC CATGCTGTTC AAATGACCAA CGTTTGGAAG
CAAGATGTAC TTGATGGCTA TAGTTCACCT GATGCGGCTG TTAATGCCAT CCGTAAATTA
GCCATACCCG GTACGGTCGC TTTACTTGCT AACGCGCTGG GTTTTATGGT GATCATGGTT
ATCGATATTC CTATGGTGCA AGAGTTGGGA ATGACGGCTT GTCTAGGCGT TGCACTGATG
ATCATCACCA ATAAAATGTT TATGCCAGTG ATACTGTCTT ACCTCACATT AGAAAAAATG
GCCTCGCATA AAAAACAGCA ACCACTACAG AAGGAACAGC AACTCTGGTG GAAGGTGTCT
GCTTTGGCGA CCCCGAAACC CGCGCTTTTG TCAGTCTGCG TCATGTTGAT TCTGTTAACC
CTAGGGACAT GGCAATCCCG CTCGCTGCTA ACTGGAGATA TTGGTAGCGG TGTGCCGGAG
CTCAGAGAGG ATTCACAATA TAATCTCGAT AATGCACAGA TTATTAAAGA CTATTCTATC
GGAATGGATG TCTTATCAGT GTATCTTGAA AGCTATAAGC GGGATGAATC TTGCCTTGAT
TGGGAAGTGA TGAATGCAGT TGACCGGTTT GATTTTCATA TGCGGGGTGT CGATGGTGTC
CGCTCGGTAA AGACCACTGC GGGTTTAGCT AAATTATATG TGTCTGGCAA TAACGAAGGT
AACCCCTTAT GGAGAACTTT ACAAAGGGAT CCAAGCGCAT TGCTTGCCGG TGCGAGTGCT
GCAAATCCGT TACATGCGCT TAATGATAAC GGTTGTAAAA CCATTAACAT GTTGGTTTAT
TTAAATGATC ATCAAGATGC AACGCTTAAG CATGTAGTGA AAGAAATTAG GCTTTTTACC
GACAGCCAAA ACATCTCTAA TGCTGAGTTT AAGTTATTGG GTGGTAACGC TGGCGTCGCA
GCAGCAACCA ATGAAGCGGT AGAAAAAGCT GAAGTACAGA TGCTTATCTC TATCTTCAGC
GCAATTAGTT TATTGTGTTG GGTAACCTTT CGTTCTGCCA GAGGTGTGTT ATGTGTGATT
CTGCCGTTAA TGTTAGTTTG CATACTTTGT AATGCACTAA TGGCCATACT TGGAATTGGT
CTGAAAGTGT CAACCCTGCC TGTGATTGCA CTAGGAATTG GCGTTGGCGT GGATTACGGG
ATCTATATAT ACGAGAAGAT GCAACATTCA CTTTATCAAG GCCACGATTT GCGTAACTCC
TTTTATAAAG CGATGCGAAG CCGTGGTACC GCTGCAGTGT TTACTGCGGT AACTATGTCT
ATTGGTGTCG GGACCTGGGC TTTTTCCGCG CTAAAATTTC AGGCCGACAT GGGCATTTTA
TTAGCGTTTA TGTTTCTCGT GAATGTATTA GGGGCGATAT TCTTGTTGCC GGCGCTTGCT
TGTCTCCTCG GTGTAAAACC AGCAAAAGAG GCGCAGGGCG CAGTTACAGA TACGCTTAAA
AATAACATTG AAAATATAGC CATCGCCACA GACAAACCAT TACAGACATA A
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| Protein sequence | MSLSQSSSNS STEISLLKRF VDFSARQLIQ KRKPLGLLFL LITLLLSYSA LDTRFDPGFT
KLVPIQHPYM QAFLKHSSTF TGSNRVMVSM TWTGEGDIYN AEFLNRLRKV HDEVIFTPGI
NRTTVRSLFA PEVRYMEVTE FGFMGDVVIP SRFTADEAGL NWVRTNVTKS GQVGNLVSND
LKSAMVQADL METDPETGEA TDYAKVAAHL EQIRSELAGQ GIDIQIIGFA KVMGDVMDGL
STVLLFFVIA FIVTLLLLWR YTLSLKLTLL AITVALLPVV WLLGILPLLG YGIDPMSVLV
PFLIFSIGVS HAVQMTNVWK QDVLDGYSSP DAAVNAIRKL AIPGTVALLA NALGFMVIMV
IDIPMVQELG MTACLGVALM IITNKMFMPV ILSYLTLEKM ASHKKQQPLQ KEQQLWWKVS
ALATPKPALL SVCVMLILLT LGTWQSRSLL TGDIGSGVPE LREDSQYNLD NAQIIKDYSI
GMDVLSVYLE SYKRDESCLD WEVMNAVDRF DFHMRGVDGV RSVKTTAGLA KLYVSGNNEG
NPLWRTLQRD PSALLAGASA ANPLHALNDN GCKTINMLVY LNDHQDATLK HVVKEIRLFT
DSQNISNAEF KLLGGNAGVA AATNEAVEKA EVQMLISIFS AISLLCWVTF RSARGVLCVI
LPLMLVCILC NALMAILGIG LKVSTLPVIA LGIGVGVDYG IYIYEKMQHS LYQGHDLRNS
FYKAMRSRGT AAVFTAVTMS IGVGTWAFSA LKFQADMGIL LAFMFLVNVL GAIFLLPALA
CLLGVKPAKE AQGAVTDTLK NNIENIAIAT DKPLQT
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