| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2101 |
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| Symbol | |
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| ID | 5662494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2543977 |
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| End bp | 2545353 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236696 |
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| Product | alpha-L-glutamate ligase |
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| Protein accession | YP_001501956 |
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| Protein GI | 157961922 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
[COG4067] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00703256 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA ATAAGTTTAT TATCGGAAGT GAAGAGTGGT GTGCATTCCC AGCTCTTGGT
GTTCCTGCAA TTAAAGCTAG AGTAGACTCT GGCGCCAGAA CGTCATCAAT CCATGCTGTA
AATATCCGTC CTTTTAAAAG AGAAGGCGAG CCATGGGTTT CTTTTGAACT TCATCCGATA
CAAAACAGTC GCAAGATCAT TCTCAGATGT GAGAGTAAGG TTGTTGATCG CCGTAATATT
AAGAGTTCTA ACGGTGAATC AGAGAAACGT TATGTTATTG CATCTGTTAT CCAGTTAGGT
GGTAATGCAT GGGAAGTTGA GTTGACCTTA ACTAACCGTG ACAGCATGGG CTACCGTATG
CTGTTAGGTC GTGAAGCGAT GAGCAACAAG ACCTTGGTTG ACCCATCAGA ATCATTTTGT
TTAGGTGAGA AGGGCGACCT AGAGGTTGAG CAACTTTACG GTGTTAAAAC AGCTAAGAAA
AGTGGTCTTA AGATCGGATT GCTAGCCAGT AACCCAGACT TGTACAGTAA CCGCCGTATC
ATTGAAGCCG GTGAACAGCG CGGCCACGAA ATGGTATTCT TAAATATCAG CCAATGTTAC
TTGAAGCTAG ATGCGTCTTC GCCAGAAGTT CACTATCGTG GTGGCAGAGT TCTTAATAAC
GTTGATGCGG TTATTCCACG TATTAGACCA AGCATGACCT TCTACGGTTG CGCGTTGACT
CGTCACTTTG AAAGTTTGAA TATCGAAGCG TTAAACACTT CTGATGCGAT TACTCGCTCA
AGAGATAAGC TGTTTTCGCT GCAGTTATTG CAAAAGAATA ACCTAGATAT TCCAACGAGT
GGTTTTGCTA ACTCGCCTGT TGATACTAAA GATCTTATCG ATATGGTTGG CGGCGCTCCG
CTTATCGTTA AGTTGCTGGA AGGTACACAA GGTAAGGGCG TTGTCCTAGC GGAAACAACT
AAAGCAGCAG AGAGTGTAAT TAACGCATTT AAATCTCTGC GTGTTAACTT ACTTGTGCAA
GAGTTTATTA AAGAAGCTCA AGGTAAAGAC TTACGCTGTT TTGTAATTGA CGGTAAGATT
GTTGCGTCAA TTGAGCGTAC AGCCGCTCCT GGTGAGTTCA GAGCTAACAT TCATATGGGT
GGTAGTGCAT CAATCGTTTC AGTGAGTGCT GCAGAAAAAC AATTGGCGAT TAAAGCAGCC
AAAACTATGG GTTTACGTGT TGCCGGTGTT GATATTATTC GTTCTAGCCG AGGACCTCTA
TTACTAGAGA TAAACTCTTC ACCAGGACTT GAAGGTATTG AATCTGCTAC AGGTATTGAT
ATCGCTGGTG CGATGATCGA ATCTATCGAG AAGAAACTAG GTTGGAAGGC TGATTAA
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| Protein sequence | MSDNKFIIGS EEWCAFPALG VPAIKARVDS GARTSSIHAV NIRPFKREGE PWVSFELHPI
QNSRKIILRC ESKVVDRRNI KSSNGESEKR YVIASVIQLG GNAWEVELTL TNRDSMGYRM
LLGREAMSNK TLVDPSESFC LGEKGDLEVE QLYGVKTAKK SGLKIGLLAS NPDLYSNRRI
IEAGEQRGHE MVFLNISQCY LKLDASSPEV HYRGGRVLNN VDAVIPRIRP SMTFYGCALT
RHFESLNIEA LNTSDAITRS RDKLFSLQLL QKNNLDIPTS GFANSPVDTK DLIDMVGGAP
LIVKLLEGTQ GKGVVLAETT KAAESVINAF KSLRVNLLVQ EFIKEAQGKD LRCFVIDGKI
VASIERTAAP GEFRANIHMG GSASIVSVSA AEKQLAIKAA KTMGLRVAGV DIIRSSRGPL
LLEINSSPGL EGIESATGID IAGAMIESIE KKLGWKAD
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