Gene Spea_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2073 
SymbolrpsA 
ID5662466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2513156 
End bp2514823 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content44% 
IMG OID641236668 
Product30S ribosomal protein S1 
Protein accessionYP_001501928 
Protein GI157961894 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.21785e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTA ATGAACTTGA ATTCCGTCCT 
GGTTCTATCG TACGTGGTGT AGTTGTTGCC ATCGAAAACG GTATGGTACT AGTTGACGCA
GGTCTTAAGT CTGAAAGCCC AATCCCAGCT GAACAATTCA AGAACGCTCA AGGCGCTCTA
GAAGTTGCTG TTGGTGATGA AGTTGACGTA GCTCTTGACT CTGTTGAAGA TGGTTTCGGT
GAAACTCAAC TTTCTCGTGA GAAAGCTAAG CGTCACGAAG CTTGGATCGT TCTAGAAAAA
GCGTACGAAG ATGCTGAAAC TGTAATCGGT ATCATCAATG GTAAGGTTAA AGGCGGTTTC
ACTGTTGAAT TAAACGGTAT CCGTGCATTC CTACCAGGTT CTCTAGTTGA CGTTCGCCCA
GTTCGCGACA CAGCTCACCT AGAAAACAAA GAATTAGAAT TCAAAGTTAT CAAGCTTGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCTGA AAGCAGCGCA
GAGCGTGATG CTCTTCTTGA GAACCTTCAA GAAGGTCAAT CAGTTAAGGG TATCGTTAAG
AACCTTACTG ACTACGGTGC ATTCGTTGAT CTTGGTGGTG TTGACGGTCT TCTACATATC
ACTGATATGG CTTGGAAGCG TGTTAAGCAC CCATCTGAAA TCGTTAATGT TGGTGACGAA
ATCAACGTTA AAGTTCTTAA GTATGACCGT GAGCGTACAC GCGTATCACT AGGTCTTAAG
CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAGCGCT ACCCAGAAAA CACACGTTTG
ACTGGTCGCG TAACTAACCT AACTGACTAC GGTTGTTTCG TTGAAATCGA AGAAGGCGTT
GAAGGTCTTG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATCCA CCCATCTAAG
GTTGTTAACC TAGGTGATGA AGTTGAAGTT CTAGTTCTTG ACATCGATGA AGAGCGTCGT
CGTATCTCTC TAGGTCTTAA GCAATGTAAG ACTAACCCAT GGGATGATTT CGCAGAGCGT
TTCAACAAGG GCGACAAGGT TTCTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTC
ATCGGTCTTG ACGGCGGCAT CGACGGTCTA GTTCACCTTT CTGACATCTC TTGGAACGGT
ACTGGCGAAG ACGCAGTTGC TGAATACAAG AAAGGCGACG AAATCCACGC TGTAGTTCTT
TCAGTAGACC CAGAGCGTGA GCGTATCAGC TTAGGCGTTA AGCAAACTGA AGACGATCCA
TTCAACGCAT ACCTTGCTGA CAAGAAGAAA GGTGTTGTAG TAAATGGTGT TGTTACTGCA
GTTGACGCAA AAGGTGTTAC AATTGAACTA GCTGAGACTG TTGAAGGTTA CCTTCGCGTT
TCAGATATCT CTCGTGAGCG CATCGAAGAT GCATCAACAG TTTACTCTGT AGGTGACAAA
GTCGAATCTA AGTTCATGGG TGTGGATCGT AAGAACCGCA CTATCAGCCT ATCTATCCGT
GCGAAAGATG AAGCTGAAGA GAAAGAAGCA ATGGCTAGCT TGAACAGCCA GGAAGACGCT
GTGATGAGCA GTGCAATGGC TGAAGCGTTT AAAGCAGCTC GTAAATAA
 
Protein sequence
MTESFADLFE QSLNELEFRP GSIVRGVVVA IENGMVLVDA GLKSESPIPA EQFKNAQGAL 
EVAVGDEVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTAHLENK ELEFKVIKLD QKRNNVVVSR RAVIESESSA
ERDALLENLQ EGQSVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPENTRL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK TNPWDDFAER
FNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEDAVAEYK KGDEIHAVVL
SVDPERERIS LGVKQTEDDP FNAYLADKKK GVVVNGVVTA VDAKGVTIEL AETVEGYLRV
SDISRERIED ASTVYSVGDK VESKFMGVDR KNRTISLSIR AKDEAEEKEA MASLNSQEDA
VMSSAMAEAF KAARK