Gene Spea_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2047 
Symbol 
ID5662440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2480594 
End bp2481181 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content42% 
IMG OID641236642 
Producthypothetical protein 
Protein accessionYP_001501902 
Protein GI157961868 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00634487 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACC TATTTGCCCA TCTAGCACGA ATGAAATTAA TTCAACGCTG GCCGCTGATG 
TACAATGTAA GAACTGAAAA TGTTCAAGAG CATTCGCTAC AAGTCGCCAT GGTTGCGCAT 
TCACTCGCAT TAATTAGCAA CAAAAAGTTT GAAGGCAACT ACGACCCTTA TCAAGTTGCA 
ACCATAGCTA TTTTTCATGA TGCCAGTGAA ATTCTCACCG GTGATCTGCC AACCCCAGTA 
AAGTACTTCA ATAAAGAGAT AGAGGCCGAG TACAAAAAAA TTGAAGCCAT CGCCGAGCAG 
CGCCTCCTAG AGATGGTACC TGAAGAGTTT AAAGAAGATT ATCAAGCCTT ACTCACCAGT 
GAACATGCCG ACAAAGAATA CAAGGCATTG GTCAAGTCTG CAGACACCCT GTGTGCCTAC 
CTAAAATGCC TTGAAGAAAG ACGTGCTGGT AATACTGAAT TTAACACTGC ACAGAAACGG 
CTCGAACAAA GCCTTAAGAA TGACCCTAAC CCTGCCGTCA ATTATTTTAT TGAATGTTTT 
ATTCCAAGCT TCACCCTAGA TCTCGACGAT ATCAATAAGC TGCTTTAA
 
Protein sequence
MSHLFAHLAR MKLIQRWPLM YNVRTENVQE HSLQVAMVAH SLALISNKKF EGNYDPYQVA 
TIAIFHDASE ILTGDLPTPV KYFNKEIEAE YKKIEAIAEQ RLLEMVPEEF KEDYQALLTS 
EHADKEYKAL VKSADTLCAY LKCLEERRAG NTEFNTAQKR LEQSLKNDPN PAVNYFIECF 
IPSFTLDLDD INKLL