| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2032 |
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| Symbol | |
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| ID | 5662425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2457973 |
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| End bp | 2459676 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236627 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001501887 |
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| Protein GI | 157961853 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0709763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC GTGTAGTCAT AGATCCAATC ACTCGTATTG AAGGACATCT ACGAGTCGAA
GTCGAAGTCG ACGAAAATAA TGTTATTCAG AAAGCCTGGT CATCTTCTAC TTTGTGGCGC
GGCATTGAAG TCATTTTAAA AGGCCGTACA CCTATGGATG TTGGCCTCAT CGTTCAACGT
ATTTGCGGCG TGTGTACCTA TTCACACTAT CGCTGCGGTA CAGAAGCGGT AGAAAATGCA
TTGGGCGTAA AAATTCCACT CAATGCAAAA TACCTTAGAA GCTTAATGCA AACATCGCTT
TATATGCATG ACCATATCGT GCATTTCTAT CACCTTCACG GCCTAGATTG GGTCGATGTA
GTTTCAGCAT TGAGCGCCGA TCCAGCGCTA GCCGCGCAAG AAGCAATGAA GTACACCGCT
AACCCTATCG CTGCAGGTGA AGGCGATCTT CGCGCAGTAC AAGAGCGTGT AGCTGGTCTT
GTTGAAACTG GTAAGTTAGG CCCATTCGCA AATGCATACT GGGGTAATGG CACCTATAAG
TTCACCCCAG AGCAAAACCT AATTGCTCTA TCGCATTACT TAAAAGCACT AGAAATTCAG
CGTATCGCAG CAGAGATGCT AGCTATCTTC GGTGGTAAGT CGCCTCACCC ACAATCAATC
GTTGTCGGTG GTGTCACTTC AGTACGCGAC ATGCTAAGCC CTGCTCGCTT GCAAGAGTGG
AAGCAAAAAC ATCAAATCGT TCAAGACTTT ATTATCCGCG CTTATAAAGC AGACATCGTG
ATGGCGGCTG CTGCATTTGG CGCTGAACCA AGTGTTCTCG GTGGCGTAAA CGTTAAGAAC
TTCCTCGCAA CTGAAGACTT CCTGTTAAGT GATGGCCAGT ACATGTTTAA CCAAGGCGTT
ATCATGAATG GCGATCTTGG AAATGTGAGT GACTTAGATC CAGACATGAT TGCAGAAGAT
GCGACTCACG CTTGGTATAA GGCTGACGGC CCACAGCATC CATATGACGG TACAACAGTT
CCTGATTACA CAGGCTTTGT TGAAAGAGAT ACCGTTTACG GTAAGTTACC GACTGTCGAT
GGCGACGGTA AGTATACTTG GGTTAAGTCA CCACGTTACA ACGGTGAACC TGTCGAAGTG
GGCCCACTGG CAAGCCTATT AGTTAGCTAT GCTCGTGGTA ACCAAGTCGT TGTTGACTCA
GTAAATGGTT TACTGGAAGC GACTGGCCTC CCCGTTGGAG CATTATTCAC CACATTGGGC
CGCACCGCCG CACGTATGCT GCAAACGGTT ATCGTTGCCG AAGAGGGTCT TAAGACATTC
GATGCAATGC TAACCAACAT GCAGTCGGAC GAAGCCACTT ACGTGAAACC TGAGATAGAT
TCCAGCAAAG AGTATGTTGG CCATGCCATG ATTGAAGCGC CGCGCGGCAT GCTTAGTCAC
TGGATCCGCA TCAAGGGGGG CTTAGTTGAG AACTACCAAG CGGTAGTGCC GACAACTTGG
AATGCGGGTC CCGTAGATGC ACAGGGCAAA ATGGGACCTT ATGAAGCCTC ACTTATTGGC
TTAAAGCTTG AAGATCCTAC TAAGCCTTTA GAAGTTATCC GTATTATTCA CTCTTTTGAC
CCTTGTATGG CGTGTGCTGT ACACGTAATG GATTACAAAG GCCAAAACCT AGGTGAATTT
AAAATTGATC CCAACGGATT TTAA
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| Protein sequence | MSKRVVIDPI TRIEGHLRVE VEVDENNVIQ KAWSSSTLWR GIEVILKGRT PMDVGLIVQR
ICGVCTYSHY RCGTEAVENA LGVKIPLNAK YLRSLMQTSL YMHDHIVHFY HLHGLDWVDV
VSALSADPAL AAQEAMKYTA NPIAAGEGDL RAVQERVAGL VETGKLGPFA NAYWGNGTYK
FTPEQNLIAL SHYLKALEIQ RIAAEMLAIF GGKSPHPQSI VVGGVTSVRD MLSPARLQEW
KQKHQIVQDF IIRAYKADIV MAAAAFGAEP SVLGGVNVKN FLATEDFLLS DGQYMFNQGV
IMNGDLGNVS DLDPDMIAED ATHAWYKADG PQHPYDGTTV PDYTGFVERD TVYGKLPTVD
GDGKYTWVKS PRYNGEPVEV GPLASLLVSY ARGNQVVVDS VNGLLEATGL PVGALFTTLG
RTAARMLQTV IVAEEGLKTF DAMLTNMQSD EATYVKPEID SSKEYVGHAM IEAPRGMLSH
WIRIKGGLVE NYQAVVPTTW NAGPVDAQGK MGPYEASLIG LKLEDPTKPL EVIRIIHSFD
PCMACAVHVM DYKGQNLGEF KIDPNGF
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