| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1983 |
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| Symbol | |
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| ID | 5662377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2407689 |
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| End bp | 2410793 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236580 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001501840 |
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| Protein GI | 157961806 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000463224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTAA CTGATATTTC GGTTAAGCGA CCGGTCTTCG CTTCAGTCAT CAGTATTCTG
CTCATCATAT TTGGCCTAGT AGCCTTTGAA AAGCTGCCGT TGAGAGAGTA CCCCAATATC
GACCCTCCTG TGGTTTCAAT TCAAACTAAT TACCGCGGTG CCAGTGCCGC AGTCGTTGAA
AGCCGTATCA CTCAGCTAGT AGAAGATCGG ATCAGTGGCG TTGAGGGGAT TAAGCACATC
AGTTCATCGA GCAGTGATGG CCGCTCAAAT GTAACCCTAG AATTCGATGT TGGGCGAGAC
ATTGAAGCCG CAGCTAACGA TGTGCGTGAT AGAGTATCGG GCTTACTCAA CAACCTTCCA
GAAGAGGCTG AACCACCAGA AGTTCAAAAG GCCAATGGTG GAGACGAAGT GATCATGTGG
TTAAATCTGG TATCGGATCA GATGACAACT TTGCAATTGA CTGATTACGC CAGACGTTAC
TTGATTGATC GCTTTTCTGT TATAGATGGT GTGGCTAACA TGCGCCTCGG TGGCGGTAAA
GTTTATGCAA TGCGAGTGTG GATTGACAGG CAGGCGCTTG CGGCGAGAAA TTTAACCGTT
GCCGATATTG AAGCGGCACT TCGCTCAGAA AACGTCGAGC TGCCAGCAGG TAGCGTTGAA
TCGAAAGAGC GCCACTTTAC TGTACGCTTA GAGCGAAGTT TTAAGACTTC CGATGATTTT
GCTAACTTGG TATTGGTTGA GGGCGAAGAT GGTTACCTCG TCAAACTTGG CGATGTGGCA
AAGGTGGAAA TAGGCTCTGA AGAGGAGCGT ATTACCTTTA GGGGTAACCG CGAAGCTATG
ATTGGCTTAG GAGTCTCTAA GCAATCGACG GCGAACACCT TAGACGTCGC AAGAGCCGCC
AATAAATTGG TCGACCAAAT TAATCCAACC CTACCAGCAG GTATGGAGAT AAAGCGTTCT
TACGACAGCT CGGTATTTAT CGAGGCGTCA GTTAAAGAGG TATACCAAAC CCTGTTCATT
GCGATGTTTT TAGTCATAGT CGTAATTTAT CTGTTTCTTG GTAGCGTGCG CGCCATGTTA
ATTCCAGCAT TAACGGTTCC AGTATCCTTA ATGGCGACAT TCATTGTGCT GTTTGCCCTA
GGCTATACCA TTAACTTACT CACTCTATTG GCGATGATCT TGGCTATCGG TATGGTCGTC
GACGATGCGA TTGTGGTGCT TGAAAACATC CACAGACGAA TAGAGGAGGG GGATTCGCCA
TTGAAGGCGG CTTATCTCGG CGCCAGAGAG GTGGCATTTG CTGTGGTCGC AACCACCTTA
GTATTGGTAG CCGTTTTTAT GCCTATTACT TTCTTGGAAG GTGATTTAGG TAAGCTCTTT
AAAGAGTTTG CCGTTGCCAT GAGCGCAGCA GTGATTTTCT CAAGCATTGT GGCATTAACA
CTCAGTCCTA TGATGTGTTC AAAAGTACTT AAGCCGTCTA CTGAAGATCC TTGGTTGGTA
CGTAAGATTG ATTCGGGAAT GGATAAGCTA TCGGGCTATT ACCGCTCAAC TTTAACGAGC
GCGATGCGCC ATCCATTTTT AGTCTCTTCG TTAATCTTAG TGGCATTAGT GTGCAGTGCT
TTTCTGGCTA AAGAGGTGCC TCAGGAGTTC GCCCCAAGAG AAGATAGGGG CTCTATGTTC
CTGATTGTAA ATGGCCCTCA GGGGGCAAGC TTTGAATACA TTGAGTCCTA TATGGATGAA
ATTGAGAATC GCTTAATGCC ATTGGTTGAG GCTGGCGAGA TAAAGCGTCT GTTGATCCGT
GCACCTCGTG GTTTCGGCCG CAGTGCAAAC TTCTCTAACG GTATGGCAAT TATTGTGTTG
GAAGATTGGG CGGTGAGGCG CAGCGCTTTT GAGATCATCG GTGATATAAG GGGGCGGCTA
TCAGACTTGG CTGGCGTTCG AGCATTTCCA GTTATGCGTC AAGCATTTGG CCGCGGAGTT
GGCAAGCCTG TGCAGTTTGT ATTAGGTGGC CCAAGTTATG AAGAGTTAGC AAGATGGCGC
GATATTATCA TCGAAAAGGC CAAAGAGAAC CCCAATCTTG TGGGCTTAGA TCATGATTAT
AATGAGACCA AACCGCAGCT TAGAGTGGTG ATAGATAAAG ACAGAGCAGC CAGCCTAGGT
GTCTCTATTT CACATATTGG TCGTACGCTA GAGTCGATGC TAGGCTCTCG TTTGGTCACA
ACCTTTATGA GAGATGGTGA AGAGTACGAT GTGATTATTG AAGGTAATCG AGATAATCAA
AATACGGCTA ATGATTTAGA GAACATCTAT GTGCGGTCGG AGAGAAGTAA GGAGCTCATC
CCTTTATCTA ACCTTATTTC TATTGAGGAG TTTGCAGACG CGAGCCAGCT CAACCGATAC
AACCGTATGC GAGCTATCAC GATTGAAGCA AACCTCGCCG ACGGATACAG CTTAGGCGAA
GCATTAGATT ACTTGAATGA TTTGACCCAT GAATACCTGC CTGCGGAGGC AATAGTCAGT
TATAAGGGCC AATCACTGGA TTATCAAGAC TCAGGTAATT CGATGTACTT TGTGTTTATT
TTAGCGCTTG GGATTGTTTT TTTAGTGTTA GCTGCGCAGT TTGAAAGCTA TGTTCACCCG
CTAGTTATCA TGCTTACGGT GCCTTTAGCG ACAATGGGAG CCTTAATTGG TTTATGGTTA
ACGGATCAAA GCTTGAATAT CTACAGTCAG ATAGGGATTA TCATGCTGGT GGGGTTAGCT
GCTAAGAATG GTATCTTGAT TGTTGAATTC GCTAACCAGT TAAGAGATAA AGGGGTTGAG
TTTCAGCAAG CAATTATCCA AGCGTCGAGC CAGAGACTCA GACCTATCTT GATGACGGGT
ATTACAACTG CAGCTGGAGC CGTTCCTTTA GTGCTTTCTG AAGGGGCGGG CGCAGAAACC
CGTTTCGTTA TTGGTGTCGT CGTGCTGTCA GGGATCACCT TGGCCACCTT CTTCACTCTA
CTGGTTATTC CAGTCGCTTA TTCTTTGTTA GCCAGAAATA CCGGCTCGCC ACAGGCGATA
GCCAAACAGC TAGAGCAAGA GTTAAAAGAT GAGGTTGTTA CTTAA
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| Protein sequence | MILTDISVKR PVFASVISIL LIIFGLVAFE KLPLREYPNI DPPVVSIQTN YRGASAAVVE
SRITQLVEDR ISGVEGIKHI SSSSSDGRSN VTLEFDVGRD IEAAANDVRD RVSGLLNNLP
EEAEPPEVQK ANGGDEVIMW LNLVSDQMTT LQLTDYARRY LIDRFSVIDG VANMRLGGGK
VYAMRVWIDR QALAARNLTV ADIEAALRSE NVELPAGSVE SKERHFTVRL ERSFKTSDDF
ANLVLVEGED GYLVKLGDVA KVEIGSEEER ITFRGNREAM IGLGVSKQST ANTLDVARAA
NKLVDQINPT LPAGMEIKRS YDSSVFIEAS VKEVYQTLFI AMFLVIVVIY LFLGSVRAML
IPALTVPVSL MATFIVLFAL GYTINLLTLL AMILAIGMVV DDAIVVLENI HRRIEEGDSP
LKAAYLGARE VAFAVVATTL VLVAVFMPIT FLEGDLGKLF KEFAVAMSAA VIFSSIVALT
LSPMMCSKVL KPSTEDPWLV RKIDSGMDKL SGYYRSTLTS AMRHPFLVSS LILVALVCSA
FLAKEVPQEF APREDRGSMF LIVNGPQGAS FEYIESYMDE IENRLMPLVE AGEIKRLLIR
APRGFGRSAN FSNGMAIIVL EDWAVRRSAF EIIGDIRGRL SDLAGVRAFP VMRQAFGRGV
GKPVQFVLGG PSYEELARWR DIIIEKAKEN PNLVGLDHDY NETKPQLRVV IDKDRAASLG
VSISHIGRTL ESMLGSRLVT TFMRDGEEYD VIIEGNRDNQ NTANDLENIY VRSERSKELI
PLSNLISIEE FADASQLNRY NRMRAITIEA NLADGYSLGE ALDYLNDLTH EYLPAEAIVS
YKGQSLDYQD SGNSMYFVFI LALGIVFLVL AAQFESYVHP LVIMLTVPLA TMGALIGLWL
TDQSLNIYSQ IGIIMLVGLA AKNGILIVEF ANQLRDKGVE FQQAIIQASS QRLRPILMTG
ITTAAGAVPL VLSEGAGAET RFVIGVVVLS GITLATFFTL LVIPVAYSLL ARNTGSPQAI
AKQLEQELKD EVVT
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